Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC27Q2M243 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC27Q2M243 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC27Q2M243 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC27Q2M243 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CCDC27Q2M243 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC27Q2M243 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC27Q2M243 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC27Q2M243 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC27Q2M243 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CCDC27Q2M243 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC27Q2M243 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC27Q2M243 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CCDC27Q2M243 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC27Q2M243 AC005229.1-201ENST00000392885 409 ntBASIC19.9■□□□□ 0.78
CCDC27Q2M243 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CCDC27Q2M243 TDH-203ENST00000531764 1110 ntBASIC19.9■□□□□ 0.78
CCDC27Q2M243 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC27Q2M243 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
CCDC27Q2M243 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC27Q2M243 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC27Q2M243 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC27Q2M243 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CCDC27Q2M243 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC27Q2M243 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC27Q2M243 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC27Q2M243 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC27Q2M243 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC27Q2M243 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC27Q2M243 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC27Q2M243 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC27Q2M243 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC27Q2M243 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC27Q2M243 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC19.89■□□□□ 0.78
CCDC27Q2M243 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC27Q2M243 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC27Q2M243 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC27Q2M243 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC27Q2M243 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC27Q2M243 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC27Q2M243 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC27Q2M243 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC27Q2M243 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC27Q2M243 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC27Q2M243 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CCDC27Q2M243 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC27Q2M243 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC27Q2M243 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CCDC27Q2M243 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC27Q2M243 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
CCDC27Q2M243 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC27Q2M243 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC27Q2M243 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC27Q2M243 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC27Q2M243 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC27Q2M243 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC27Q2M243 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC27Q2M243 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CCDC27Q2M243 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC27Q2M243 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC27Q2M243 AC008735.3-201ENST00000596646 500 ntBASIC19.89■□□□□ 0.77
CCDC27Q2M243 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC27Q2M243 TP73-213ENST00000604479 1623 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC27Q2M243 AC023090.2-201ENST00000625182 2110 ntBASIC19.89■□□□□ 0.77
CCDC27Q2M243 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC27Q2M243 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CCDC27Q2M243 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC27Q2M243 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC27Q2M243 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC27Q2M243 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC27Q2M243 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC27Q2M243 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC27Q2M243 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC27Q2M243 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC27Q2M243 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC27Q2M243 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC27Q2M243 AC092933.1-201ENST00000393644 945 ntBASIC19.88■□□□□ 0.77
CCDC27Q2M243 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC27Q2M243 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC27Q2M243 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC27Q2M243 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC27Q2M243 GAPDHP21-201ENST00000450301 1010 ntBASIC19.88■□□□□ 0.77
CCDC27Q2M243 AC026434.2-201ENST00000506094 1078 ntBASIC19.88■□□□□ 0.77
CCDC27Q2M243 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC27Q2M243 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC27Q2M243 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC27Q2M243 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.88■□□□□ 0.77
CCDC27Q2M243 RPS15-202ENST00000585665 467 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC27Q2M243 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC27Q2M243 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC27Q2M243 AC012645.4-201ENST00000610691 1061 ntBASIC19.88■□□□□ 0.77
CCDC27Q2M243 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
CCDC27Q2M243 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC27Q2M243 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC27Q2M243 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC27Q2M243 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC27Q2M243 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC27Q2M243 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC27Q2M243 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CCDC27Q2M243 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms