Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFX7Q2KHR2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFX7Q2KHR2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFX7Q2KHR2 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.43■□□□□ 0.54
RFX7Q2KHR2 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RFX7Q2KHR2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFX7Q2KHR2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFX7Q2KHR2 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC18.43■□□□□ 0.54
RFX7Q2KHR2 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
RFX7Q2KHR2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RFX7Q2KHR2 KLF2P2-201ENST00000416807 1039 ntBASIC18.42■□□□□ 0.54
RFX7Q2KHR2 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 C2orf27AP3-201ENST00000434123 579 ntBASIC18.42■□□□□ 0.54
RFX7Q2KHR2 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 RPL13AP20-201ENST00000459725 609 ntBASIC18.42■□□□□ 0.54
RFX7Q2KHR2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 AC145423.3-201ENST00000615987 467 ntBASIC18.42■□□□□ 0.54
RFX7Q2KHR2 AL354718.3-201ENST00000616414 581 ntBASIC18.42■□□□□ 0.54
RFX7Q2KHR2 AC138951.2-201ENST00000623455 1161 ntBASIC18.42■□□□□ 0.54
RFX7Q2KHR2 CR382287.1-201ENST00000623954 586 ntBASIC18.42■□□□□ 0.54
RFX7Q2KHR2 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.42■□□□□ 0.54
RFX7Q2KHR2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RFX7Q2KHR2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 AC020907.1-201ENST00000616460 1350 ntBASIC18.41■□□□□ 0.54
RFX7Q2KHR2 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 HYMAI-201ENST00000635591 3347 ntBASIC18.41■□□□□ 0.54
RFX7Q2KHR2 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFX7Q2KHR2 AL157414.3-201ENST00000624276 1954 ntBASIC18.41■□□□□ 0.54
RFX7Q2KHR2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms