Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA3P83110 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC17.35■□□□□ 0.37
HTRA3P83110 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC17.35■□□□□ 0.37
HTRA3P83110 RNA5SP406-201ENST00000516106 112 ntBASIC17.35■□□□□ 0.37
HTRA3P83110 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.35■□□□□ 0.37
HTRA3P83110 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC17.35■□□□□ 0.37
HTRA3P83110 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HTRA3P83110 HNRNPA1P16-201ENST00000575692 955 ntBASIC17.35■□□□□ 0.37
HTRA3P83110 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA3P83110 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.35■□□□□ 0.37
HTRA3P83110 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HTRA3P83110 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC17.35■□□□□ 0.37
HTRA3P83110 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.35■□□□□ 0.37
HTRA3P83110 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HTRA3P83110 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HTRA3P83110 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA3P83110 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HTRA3P83110 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA3P83110 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA3P83110 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA3P83110 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HTRA3P83110 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA3P83110 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA3P83110 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA3P83110 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HTRA3P83110 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC17.35■□□□□ 0.37
HTRA3P83110 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA3P83110 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA3P83110 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA3P83110 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA3P83110 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA3P83110 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA3P83110 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA3P83110 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA3P83110 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.35■□□□□ 0.37
HTRA3P83110 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA3P83110 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA3P83110 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTRA3P83110 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA3P83110 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA3P83110 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA3P83110 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA3P83110 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
HTRA3P83110 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA3P83110 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA3P83110 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA3P83110 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA3P83110 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC17.34■□□□□ 0.37
HTRA3P83110 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA3P83110 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
HTRA3P83110 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.34■□□□□ 0.37
HTRA3P83110 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA3P83110 AL157407.1-201ENST00000435784 904 ntBASIC17.34■□□□□ 0.37
HTRA3P83110 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.34■□□□□ 0.37
HTRA3P83110 ERP29P1-201ENST00000442902 706 ntBASIC17.34■□□□□ 0.37
HTRA3P83110 DUX4L50-201ENST00000455245 715 ntBASIC17.34■□□□□ 0.37
HTRA3P83110 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC17.34■□□□□ 0.37
HTRA3P83110 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC17.34■□□□□ 0.37
HTRA3P83110 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC17.34■□□□□ 0.37
HTRA3P83110 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC17.34■□□□□ 0.37
HTRA3P83110 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC17.34■□□□□ 0.37
HTRA3P83110 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA3P83110 TRMT112P3-201ENST00000580149 358 ntBASIC17.34■□□□□ 0.37
HTRA3P83110 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC17.34■□□□□ 0.37
HTRA3P83110 AC018629.1-201ENST00000623381 1736 ntBASIC17.34■□□□□ 0.37
HTRA3P83110 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.34■□□□□ 0.37
HTRA3P83110 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC17.34■□□□□ 0.37
HTRA3P83110 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HTRA3P83110 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA3P83110 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA3P83110 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA3P83110 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA3P83110 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HTRA3P83110 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTRA3P83110 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTRA3P83110 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTRA3P83110 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTRA3P83110 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTRA3P83110 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
HTRA3P83110 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTRA3P83110 AL157414.3-201ENST00000624276 1954 ntBASIC17.33■□□□□ 0.37
HTRA3P83110 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTRA3P83110 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.33■□□□□ 0.37
HTRA3P83110 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTRA3P83110 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTRA3P83110 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC17.33■□□□□ 0.37
HTRA3P83110 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HTRA3P83110 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
HTRA3P83110 AC012508.2-201ENST00000567613 1472 ntBASIC17.33■□□□□ 0.37
HTRA3P83110 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC17.33■□□□□ 0.36
HTRA3P83110 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.33■□□□□ 0.36
HTRA3P83110 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.33■□□□□ 0.36
HTRA3P83110 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HTRA3P83110 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC17.33■□□□□ 0.36
HTRA3P83110 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HTRA3P83110 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC17.33■□□□□ 0.36
HTRA3P83110 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC17.33■□□□□ 0.36
HTRA3P83110 RGS5-216ENST00000449680 788 ntTSL 3 BASIC17.33■□□□□ 0.36
HTRA3P83110 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HTRA3P83110 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 262.7 ms