Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 TSSC2-201ENST00000450217 709 ntBASIC13.85□□□□□ -0.19
VBP1P61758 KRT18P34-201ENST00000488218 1270 ntBASIC13.85□□□□□ -0.19
VBP1P61758 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.85□□□□□ -0.19
VBP1P61758 AC104819.1-201ENST00000504587 486 ntBASIC13.85□□□□□ -0.19
VBP1P61758 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.85□□□□□ -0.19
VBP1P61758 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.85□□□□□ -0.19
VBP1P61758 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.85□□□□□ -0.19
VBP1P61758 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.85□□□□□ -0.19
VBP1P61758 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
VBP1P61758 AP002414.4-201ENST00000589764 1148 ntBASIC13.85□□□□□ -0.19
VBP1P61758 MTDHP4-201ENST00000600287 670 ntBASIC13.85□□□□□ -0.19
VBP1P61758 AC099336.1-202ENST00000602961 463 ntBASIC13.85□□□□□ -0.19
VBP1P61758 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VBP1P61758 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.85□□□□□ -0.19
VBP1P61758 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VBP1P61758 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.85□□□□□ -0.19
VBP1P61758 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.85□□□□□ -0.19
VBP1P61758 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VBP1P61758 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
VBP1P61758 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VBP1P61758 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
VBP1P61758 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
VBP1P61758 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
VBP1P61758 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.85□□□□□ -0.19
VBP1P61758 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
VBP1P61758 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VBP1P61758 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VBP1P61758 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.85□□□□□ -0.19
VBP1P61758 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
VBP1P61758 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VBP1P61758 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VBP1P61758 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
VBP1P61758 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
VBP1P61758 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VBP1P61758 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.84□□□□□ -0.19
VBP1P61758 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VBP1P61758 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
VBP1P61758 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VBP1P61758 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VBP1P61758 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VBP1P61758 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.84□□□□□ -0.19
VBP1P61758 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VBP1P61758 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VBP1P61758 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VBP1P61758 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
VBP1P61758 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
VBP1P61758 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VBP1P61758 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VBP1P61758 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VBP1P61758 DUSP5P1-201ENST00000441325 1139 ntBASIC13.84□□□□□ -0.19
VBP1P61758 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VBP1P61758 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VBP1P61758 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.84□□□□□ -0.19
VBP1P61758 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VBP1P61758 AL450472.2-201ENST00000603663 1156 ntBASIC13.84□□□□□ -0.19
VBP1P61758 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.84□□□□□ -0.19
VBP1P61758 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.84□□□□□ -0.19
VBP1P61758 AC083964.2-201ENST00000623988 2396 ntBASIC13.84□□□□□ -0.19
VBP1P61758 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
VBP1P61758 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VBP1P61758 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.84□□□□□ -0.19
VBP1P61758 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.84□□□□□ -0.19
VBP1P61758 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.84□□□□□ -0.19
VBP1P61758 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VBP1P61758 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
VBP1P61758 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
VBP1P61758 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VBP1P61758 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VBP1P61758 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VBP1P61758 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
VBP1P61758 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
VBP1P61758 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.84□□□□□ -0.19
VBP1P61758 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.84□□□□□ -0.19
VBP1P61758 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VBP1P61758 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
VBP1P61758 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
VBP1P61758 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.83□□□□□ -0.19
VBP1P61758 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
VBP1P61758 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
VBP1P61758 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
VBP1P61758 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
VBP1P61758 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.83□□□□□ -0.2
VBP1P61758 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
VBP1P61758 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.83□□□□□ -0.2
VBP1P61758 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VBP1P61758 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VBP1P61758 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VBP1P61758 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VBP1P61758 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.83□□□□□ -0.2
VBP1P61758 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VBP1P61758 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
VBP1P61758 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.83□□□□□ -0.2
VBP1P61758 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VBP1P61758 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.83□□□□□ -0.2
VBP1P61758 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VBP1P61758 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VBP1P61758 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VBP1P61758 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VBP1P61758 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.83□□□□□ -0.2
VBP1P61758 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms