Protein–RNA interactions for Protein: P56817

BACE1, Beta-secretase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BACE1P56817 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.5■□□□□ 0.39
BACE1P56817 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.5■□□□□ 0.39
BACE1P56817 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
BACE1P56817 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.5■□□□□ 0.39
BACE1P56817 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.5■□□□□ 0.39
BACE1P56817 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BACE1P56817 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
BACE1P56817 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BACE1P56817 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
BACE1P56817 SHC1P1-201ENST00000425230 1745 ntBASIC17.5■□□□□ 0.39
BACE1P56817 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.5■□□□□ 0.39
BACE1P56817 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
BACE1P56817 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.5■□□□□ 0.39
BACE1P56817 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BACE1P56817 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
BACE1P56817 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
BACE1P56817 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.5■□□□□ 0.39
BACE1P56817 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BACE1P56817 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.5■□□□□ 0.39
BACE1P56817 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.5■□□□□ 0.39
BACE1P56817 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.5■□□□□ 0.39
BACE1P56817 MARK2P5-201ENST00000507649 634 ntBASIC17.5■□□□□ 0.39
BACE1P56817 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.5■□□□□ 0.39
BACE1P56817 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.5■□□□□ 0.39
BACE1P56817 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
BACE1P56817 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.5■□□□□ 0.39
BACE1P56817 AC100827.2-201ENST00000563214 1194 ntBASIC17.5■□□□□ 0.39
BACE1P56817 DUX4L46-201ENST00000566845 751 ntBASIC17.5■□□□□ 0.39
BACE1P56817 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.5■□□□□ 0.39
BACE1P56817 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BACE1P56817 RN7SL574P-201ENST00000581512 297 ntBASIC17.5■□□□□ 0.39
BACE1P56817 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.5■□□□□ 0.39
BACE1P56817 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BACE1P56817 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.5■□□□□ 0.39
BACE1P56817 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.5■□□□□ 0.39
BACE1P56817 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BACE1P56817 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BACE1P56817 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
BACE1P56817 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BACE1P56817 AL359258.3-201ENST00000622910 2331 ntBASIC17.5■□□□□ 0.39
BACE1P56817 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.5■□□□□ 0.39
BACE1P56817 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
BACE1P56817 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BACE1P56817 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BACE1P56817 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BACE1P56817 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BACE1P56817 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.5■□□□□ 0.39
BACE1P56817 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.5■□□□□ 0.39
BACE1P56817 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
BACE1P56817 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BACE1P56817 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
BACE1P56817 AC012508.2-201ENST00000567613 1472 ntBASIC17.5■□□□□ 0.39
BACE1P56817 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BACE1P56817 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
BACE1P56817 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BACE1P56817 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
BACE1P56817 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BACE1P56817 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.49■□□□□ 0.39
BACE1P56817 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
BACE1P56817 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.49■□□□□ 0.39
BACE1P56817 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
BACE1P56817 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BACE1P56817 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
BACE1P56817 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BACE1P56817 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BACE1P56817 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BACE1P56817 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
BACE1P56817 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BACE1P56817 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
BACE1P56817 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.49■□□□□ 0.39
BACE1P56817 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BACE1P56817 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.49■□□□□ 0.39
BACE1P56817 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BACE1P56817 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.49■□□□□ 0.39
BACE1P56817 AC011840.2-201ENST00000563063 1520 ntBASIC17.49■□□□□ 0.39
BACE1P56817 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BACE1P56817 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BACE1P56817 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.49■□□□□ 0.39
BACE1P56817 AC010141.1-201ENST00000411585 623 ntBASIC17.49■□□□□ 0.39
BACE1P56817 ACTG1P2-201ENST00000415776 1125 ntBASIC17.49■□□□□ 0.39
BACE1P56817 HINT2P1-201ENST00000419438 481 ntBASIC17.49■□□□□ 0.39
BACE1P56817 ACTG1P11-201ENST00000425411 1125 ntBASIC17.49■□□□□ 0.39
BACE1P56817 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.49■□□□□ 0.39
BACE1P56817 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BACE1P56817 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BACE1P56817 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.49■□□□□ 0.39
BACE1P56817 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.49■□□□□ 0.39
BACE1P56817 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BACE1P56817 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.49■□□□□ 0.39
BACE1P56817 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.49■□□□□ 0.39
BACE1P56817 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BACE1P56817 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.49■□□□□ 0.39
BACE1P56817 AC020910.5-201ENST00000623668 1865 ntBASIC17.49■□□□□ 0.39
BACE1P56817 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BACE1P56817 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
BACE1P56817 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BACE1P56817 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BACE1P56817 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BACE1P56817 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
BACE1P56817 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms