Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
FOXG1P55316 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
FOXG1P55316 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
FOXG1P55316 REXO1L2P-201ENST00000425429 2069 ntBASIC13.45□□□□□ -0.26
FOXG1P55316 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
FOXG1P55316 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.45□□□□□ -0.26
FOXG1P55316 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
FOXG1P55316 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.45□□□□□ -0.26
FOXG1P55316 AC092933.1-201ENST00000393644 945 ntBASIC13.45□□□□□ -0.26
FOXG1P55316 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.45□□□□□ -0.26
FOXG1P55316 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
FOXG1P55316 ACA64.2-201ENST00000459014 129 ntBASIC13.45□□□□□ -0.26
FOXG1P55316 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
FOXG1P55316 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.45□□□□□ -0.26
FOXG1P55316 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.45□□□□□ -0.26
FOXG1P55316 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.45□□□□□ -0.26
FOXG1P55316 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.45□□□□□ -0.26
FOXG1P55316 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.45□□□□□ -0.26
FOXG1P55316 GNRHR2-203ENST00000581100 1187 ntBASIC13.45□□□□□ -0.26
FOXG1P55316 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.45□□□□□ -0.26
FOXG1P55316 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
FOXG1P55316 AC244669.2-201ENST00000612320 853 ntBASIC13.45□□□□□ -0.26
FOXG1P55316 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.45□□□□□ -0.26
FOXG1P55316 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.45□□□□□ -0.26
FOXG1P55316 PRSS30P-206ENST00000641773 873 ntBASIC13.45□□□□□ -0.26
FOXG1P55316 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
FOXG1P55316 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.45□□□□□ -0.26
FOXG1P55316 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
FOXG1P55316 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
FOXG1P55316 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
FOXG1P55316 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
FOXG1P55316 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
FOXG1P55316 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.45□□□□□ -0.26
FOXG1P55316 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
FOXG1P55316 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
FOXG1P55316 TSPY26P-202ENST00000565928 3884 ntBASIC13.45□□□□□ -0.26
FOXG1P55316 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
FOXG1P55316 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
FOXG1P55316 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.45□□□□□ -0.26
FOXG1P55316 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.45□□□□□ -0.26
FOXG1P55316 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
FOXG1P55316 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
FOXG1P55316 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
FOXG1P55316 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
FOXG1P55316 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
FOXG1P55316 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
FOXG1P55316 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.44□□□□□ -0.26
FOXG1P55316 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
FOXG1P55316 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.44□□□□□ -0.26
FOXG1P55316 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.44□□□□□ -0.26
FOXG1P55316 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
FOXG1P55316 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.44□□□□□ -0.26
FOXG1P55316 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
FOXG1P55316 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 AC006486.2-201ENST00000624246 2199 ntBASIC13.44□□□□□ -0.26
FOXG1P55316 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
FOXG1P55316 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.44□□□□□ -0.26
FOXG1P55316 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.44□□□□□ -0.26
FOXG1P55316 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 ANKRD19P-201ENST00000338192 862 ntBASIC13.44□□□□□ -0.26
FOXG1P55316 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 GK-202ENST00000378941 458 ntTSL 3 BASIC13.44□□□□□ -0.26
FOXG1P55316 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.44□□□□□ -0.26
FOXG1P55316 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
FOXG1P55316 FTH1P14-201ENST00000482930 551 ntBASIC13.44□□□□□ -0.26
FOXG1P55316 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.44□□□□□ -0.26
FOXG1P55316 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.44□□□□□ -0.26
FOXG1P55316 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.44□□□□□ -0.26
FOXG1P55316 RAB43P1-201ENST00000561790 589 ntBASIC13.44□□□□□ -0.26
FOXG1P55316 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.44□□□□□ -0.26
FOXG1P55316 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.44□□□□□ -0.26
FOXG1P55316 AC145423.3-201ENST00000615987 467 ntBASIC13.44□□□□□ -0.26
FOXG1P55316 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
FOXG1P55316 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
FOXG1P55316 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
FOXG1P55316 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FOXG1P55316 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
FOXG1P55316 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
FOXG1P55316 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.44□□□□□ -0.26
FOXG1P55316 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms