Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP11P51784 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
USP11P51784 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.32■□□□□ 0.36
USP11P51784 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
USP11P51784 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP11P51784 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP11P51784 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP11P51784 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP11P51784 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP11P51784 AL157414.3-201ENST00000624276 1954 ntBASIC17.31■□□□□ 0.36
USP11P51784 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.31■□□□□ 0.36
USP11P51784 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
USP11P51784 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
USP11P51784 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
USP11P51784 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP11P51784 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.31■□□□□ 0.36
USP11P51784 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.31■□□□□ 0.36
USP11P51784 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP11P51784 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
USP11P51784 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
USP11P51784 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
USP11P51784 KRT43P-201ENST00000434019 910 ntBASIC17.31■□□□□ 0.36
USP11P51784 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.31■□□□□ 0.36
USP11P51784 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.31■□□□□ 0.36
USP11P51784 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.31■□□□□ 0.36
USP11P51784 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
USP11P51784 KRT17P8-201ENST00000540749 863 ntBASIC17.31■□□□□ 0.36
USP11P51784 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
USP11P51784 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.31■□□□□ 0.36
USP11P51784 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP11P51784 AC132938.4-201ENST00000623835 848 ntBASIC17.31■□□□□ 0.36
USP11P51784 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP11P51784 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
USP11P51784 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP11P51784 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP11P51784 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP11P51784 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
USP11P51784 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.31■□□□□ 0.36
USP11P51784 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP11P51784 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP11P51784 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP11P51784 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP11P51784 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.31■□□□□ 0.36
USP11P51784 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP11P51784 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
USP11P51784 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.3■□□□□ 0.36
USP11P51784 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP11P51784 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
USP11P51784 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP11P51784 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
USP11P51784 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
USP11P51784 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP11P51784 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP11P51784 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP11P51784 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP11P51784 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.3■□□□□ 0.36
USP11P51784 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
USP11P51784 AL138709.1-201ENST00000614840 1693 ntBASIC17.3■□□□□ 0.36
USP11P51784 AL359258.3-201ENST00000622910 2331 ntBASIC17.3■□□□□ 0.36
USP11P51784 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP11P51784 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP11P51784 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP11P51784 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
USP11P51784 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP11P51784 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP11P51784 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP11P51784 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.3■□□□□ 0.36
USP11P51784 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP11P51784 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP11P51784 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP11P51784 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
USP11P51784 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
USP11P51784 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.3■□□□□ 0.36
USP11P51784 AC106760.1-201ENST00000508690 800 ntBASIC17.3■□□□□ 0.36
USP11P51784 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.3■□□□□ 0.36
USP11P51784 GNRHR2-203ENST00000581100 1187 ntBASIC17.3■□□□□ 0.36
USP11P51784 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP11P51784 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.3■□□□□ 0.36
USP11P51784 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.3■□□□□ 0.36
USP11P51784 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP11P51784 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP11P51784 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.3■□□□□ 0.36
USP11P51784 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP11P51784 LRRC59-203ENST00000576448 1531 ntBASIC17.3■□□□□ 0.36
USP11P51784 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.3■□□□□ 0.36
USP11P51784 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP11P51784 TSPY26P-202ENST00000565928 3884 ntBASIC17.3■□□□□ 0.36
USP11P51784 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.3■□□□□ 0.36
USP11P51784 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
USP11P51784 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
USP11P51784 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.3■□□□□ 0.36
USP11P51784 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP11P51784 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP11P51784 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.3■□□□□ 0.36
USP11P51784 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
USP11P51784 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP11P51784 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP11P51784 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.29■□□□□ 0.36
USP11P51784 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP11P51784 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms