Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC1A3P43003 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SLC1A3P43003 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.21□□□□□ -0.14
SLC1A3P43003 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC1A3P43003 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SLC1A3P43003 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SLC1A3P43003 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
SLC1A3P43003 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.2□□□□□ -0.14
SLC1A3P43003 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC1A3P43003 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SLC1A3P43003 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SLC1A3P43003 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
SLC1A3P43003 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.2□□□□□ -0.14
SLC1A3P43003 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SLC1A3P43003 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.2□□□□□ -0.14
SLC1A3P43003 AC114501.2-201ENST00000439631 535 ntBASIC14.2□□□□□ -0.14
SLC1A3P43003 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.2□□□□□ -0.14
SLC1A3P43003 KRT18P43-201ENST00000469825 1281 ntBASIC14.2□□□□□ -0.14
SLC1A3P43003 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.2□□□□□ -0.14
SLC1A3P43003 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.2□□□□□ -0.14
SLC1A3P43003 RFPL4AP1-201ENST00000530883 850 ntBASIC14.2□□□□□ -0.14
SLC1A3P43003 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC1A3P43003 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC1A3P43003 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC1A3P43003 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC1A3P43003 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC1A3P43003 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC1A3P43003 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC1A3P43003 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC1A3P43003 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SLC1A3P43003 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
SLC1A3P43003 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SLC1A3P43003 MYO15B-237ENST00000642007 4893 ntBASIC14.2□□□□□ -0.14
SLC1A3P43003 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC1A3P43003 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC1A3P43003 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC1A3P43003 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC1A3P43003 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 AC007326.2-201ENST00000624224 7579 ntBASIC14.19□□□□□ -0.14
SLC1A3P43003 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC1A3P43003 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC1A3P43003 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
SLC1A3P43003 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SLC1A3P43003 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 GRK6P1-201ENST00000400595 1711 ntBASIC14.19□□□□□ -0.14
SLC1A3P43003 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC1A3P43003 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SLC1A3P43003 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
SLC1A3P43003 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.19□□□□□ -0.14
SLC1A3P43003 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.19□□□□□ -0.14
SLC1A3P43003 CYMP-203ENST00000474680 1263 ntBASIC14.19□□□□□ -0.14
SLC1A3P43003 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.19□□□□□ -0.14
SLC1A3P43003 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC1A3P43003 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC1A3P43003 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.19□□□□□ -0.14
SLC1A3P43003 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.19□□□□□ -0.14
SLC1A3P43003 AC092337.1-201ENST00000568699 1129 ntBASIC14.19□□□□□ -0.14
SLC1A3P43003 AC004461.2-201ENST00000629517 803 ntBASIC14.19□□□□□ -0.14
SLC1A3P43003 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms