Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL15A1P39059 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC19.21■□□□□ 0.67
COL15A1P39059 PAUPAR-201ENST00000630360 2965 ntBASIC19.21■□□□□ 0.67
COL15A1P39059 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL15A1P39059 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL15A1P39059 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
COL15A1P39059 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL15A1P39059 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL15A1P39059 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC19.21■□□□□ 0.67
COL15A1P39059 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL15A1P39059 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL15A1P39059 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL15A1P39059 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC19.21■□□□□ 0.67
COL15A1P39059 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL15A1P39059 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL15A1P39059 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
COL15A1P39059 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC19.21■□□□□ 0.67
COL15A1P39059 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
COL15A1P39059 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COL15A1P39059 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COL15A1P39059 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL15A1P39059 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL15A1P39059 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL15A1P39059 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL15A1P39059 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.2■□□□□ 0.66
COL15A1P39059 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL15A1P39059 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL15A1P39059 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL15A1P39059 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL15A1P39059 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC19.2■□□□□ 0.66
COL15A1P39059 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL15A1P39059 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL15A1P39059 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC19.2■□□□□ 0.66
COL15A1P39059 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC19.2■□□□□ 0.66
COL15A1P39059 AL161670.2-201ENST00000557650 1227 ntBASIC19.2■□□□□ 0.66
COL15A1P39059 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC19.2■□□□□ 0.66
COL15A1P39059 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL15A1P39059 PCBP2-OT1-201ENST00000634357 590 ntBASIC19.2■□□□□ 0.66
COL15A1P39059 AC068587.8-201ENST00000641239 219 ntBASIC19.2■□□□□ 0.66
COL15A1P39059 AC004923.1-202ENST00000642106 209 ntBASIC19.2■□□□□ 0.66
COL15A1P39059 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
COL15A1P39059 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL15A1P39059 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
COL15A1P39059 FKBP4P6-201ENST00000457486 1332 ntBASIC19.2■□□□□ 0.66
COL15A1P39059 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL15A1P39059 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC19.2■□□□□ 0.66
COL15A1P39059 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
COL15A1P39059 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC19.2■□□□□ 0.66
COL15A1P39059 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
COL15A1P39059 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL15A1P39059 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
COL15A1P39059 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL15A1P39059 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
COL15A1P39059 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COL15A1P39059 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.2■□□□□ 0.66
COL15A1P39059 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.2■□□□□ 0.66
COL15A1P39059 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.2■□□□□ 0.66
COL15A1P39059 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.2■□□□□ 0.66
COL15A1P39059 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC19.19■□□□□ 0.66
COL15A1P39059 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC19.19■□□□□ 0.66
COL15A1P39059 FTLP1-201ENST00000449155 526 ntBASIC19.19■□□□□ 0.66
COL15A1P39059 EEF1DP6-201ENST00000449232 372 ntBASIC19.19■□□□□ 0.66
COL15A1P39059 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC19.19■□□□□ 0.66
COL15A1P39059 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL15A1P39059 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC19.19■□□□□ 0.66
COL15A1P39059 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC19.19■□□□□ 0.66
COL15A1P39059 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC19.19■□□□□ 0.66
COL15A1P39059 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC19.19■□□□□ 0.66
COL15A1P39059 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL15A1P39059 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC19.19■□□□□ 0.66
COL15A1P39059 AL805961.1-203ENST00000641078 1258 ntBASIC19.19■□□□□ 0.66
COL15A1P39059 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC19.19■□□□□ 0.66
COL15A1P39059 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.19■□□□□ 0.66
COL15A1P39059 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL15A1P39059 AL157414.3-201ENST00000624276 1954 ntBASIC19.19■□□□□ 0.66
COL15A1P39059 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
COL15A1P39059 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC19.19■□□□□ 0.66
COL15A1P39059 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.19■□□□□ 0.66
COL15A1P39059 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.19■□□□□ 0.66
COL15A1P39059 AC092850.2-201ENST00000623821 2697 ntBASIC19.19■□□□□ 0.66
COL15A1P39059 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL15A1P39059 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL15A1P39059 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.19■□□□□ 0.66
COL15A1P39059 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL15A1P39059 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
COL15A1P39059 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COL15A1P39059 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
COL15A1P39059 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL15A1P39059 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COL15A1P39059 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
COL15A1P39059 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC19.19■□□□□ 0.66
COL15A1P39059 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC19.19■□□□□ 0.66
COL15A1P39059 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC19.19■□□□□ 0.66
COL15A1P39059 PARVG-202ENST00000415224 999 ntTSL 2 BASIC19.19■□□□□ 0.66
COL15A1P39059 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC19.19■□□□□ 0.66
COL15A1P39059 TUBB8P8-201ENST00000458717 1058 ntBASIC19.19■□□□□ 0.66
COL15A1P39059 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC19.19■□□□□ 0.66
COL15A1P39059 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC19.19■□□□□ 0.66
COL15A1P39059 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC19.19■□□□□ 0.66
COL15A1P39059 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms