Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6BP35913 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
PDE6BP35913 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.72■□□□□ 0.59
PDE6BP35913 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6BP35913 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.72■□□□□ 0.59
PDE6BP35913 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6BP35913 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PDE6BP35913 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
PDE6BP35913 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PDE6BP35913 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6BP35913 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6BP35913 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.72■□□□□ 0.59
PDE6BP35913 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6BP35913 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC18.72■□□□□ 0.59
PDE6BP35913 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6BP35913 AC068418.2-201ENST00000577309 3703 ntBASIC18.72■□□□□ 0.59
PDE6BP35913 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6BP35913 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6BP35913 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.72■□□□□ 0.59
PDE6BP35913 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6BP35913 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6BP35913 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6BP35913 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.71■□□□□ 0.59
PDE6BP35913 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6BP35913 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PDE6BP35913 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.71■□□□□ 0.59
PDE6BP35913 AC092364.2-201ENST00000596710 2692 ntBASIC18.71■□□□□ 0.59
PDE6BP35913 AC080080.1-201ENST00000625121 2420 ntBASIC18.71■□□□□ 0.59
PDE6BP35913 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6BP35913 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PDE6BP35913 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6BP35913 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6BP35913 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
PDE6BP35913 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6BP35913 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC18.71■□□□□ 0.59
PDE6BP35913 AC012441.2-201ENST00000444843 739 ntBASIC18.71■□□□□ 0.59
PDE6BP35913 AC114501.1-201ENST00000445949 172 ntBASIC18.71■□□□□ 0.59
PDE6BP35913 AC073150.1-201ENST00000450406 1084 ntBASIC18.71■□□□□ 0.59
PDE6BP35913 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC18.71■□□□□ 0.59
PDE6BP35913 POU5F1P2-201ENST00000521750 823 ntBASIC18.71■□□□□ 0.59
PDE6BP35913 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC18.71■□□□□ 0.59
PDE6BP35913 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PDE6BP35913 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC18.71■□□□□ 0.59
PDE6BP35913 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
PDE6BP35913 WDR7-208ENST00000589935 544 ntTSL 4 BASIC18.71■□□□□ 0.59
PDE6BP35913 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PDE6BP35913 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC18.71■□□□□ 0.59
PDE6BP35913 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
PDE6BP35913 HLA-C-210ENST00000640219 976 ntBASIC18.71■□□□□ 0.59
PDE6BP35913 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6BP35913 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.71■□□□□ 0.59
PDE6BP35913 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PDE6BP35913 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6BP35913 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6BP35913 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
PDE6BP35913 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PDE6BP35913 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.71■□□□□ 0.59
PDE6BP35913 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PDE6BP35913 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6BP35913 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6BP35913 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.71■□□□□ 0.59
PDE6BP35913 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6BP35913 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PDE6BP35913 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PDE6BP35913 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.58
PDE6BP35913 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
PDE6BP35913 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6BP35913 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6BP35913 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6BP35913 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6BP35913 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6BP35913 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6BP35913 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6BP35913 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.7■□□□□ 0.58
PDE6BP35913 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
PDE6BP35913 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.7■□□□□ 0.58
PDE6BP35913 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
PDE6BP35913 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PDE6BP35913 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC18.7■□□□□ 0.58
PDE6BP35913 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6BP35913 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6BP35913 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6BP35913 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6BP35913 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6BP35913 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6BP35913 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6BP35913 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6BP35913 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6BP35913 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC18.7■□□□□ 0.58
PDE6BP35913 VDAC1P1-201ENST00000439229 848 ntBASIC18.7■□□□□ 0.58
PDE6BP35913 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.7■□□□□ 0.58
PDE6BP35913 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC18.7■□□□□ 0.58
PDE6BP35913 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC18.7■□□□□ 0.58
PDE6BP35913 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC18.7■□□□□ 0.58
PDE6BP35913 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
PDE6BP35913 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC18.7■□□□□ 0.58
PDE6BP35913 PAM16-211ENST00000575848 518 ntTSL 3 BASIC18.7■□□□□ 0.58
PDE6BP35913 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PDE6BP35913 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PDE6BP35913 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms