Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC21.13■□□□□ 0.97
CPS1P31327 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC21.13■□□□□ 0.97
CPS1P31327 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CPS1P31327 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC21.13■□□□□ 0.97
CPS1P31327 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC21.13■□□□□ 0.97
CPS1P31327 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC21.13■□□□□ 0.97
CPS1P31327 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC21.13■□□□□ 0.97
CPS1P31327 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC21.13■□□□□ 0.97
CPS1P31327 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC21.13■□□□□ 0.97
CPS1P31327 DBP-202ENST00000593500 712 ntTSL 2 BASIC21.13■□□□□ 0.97
CPS1P31327 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPS1P31327 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC21.13■□□□□ 0.97
CPS1P31327 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPS1P31327 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPS1P31327 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPS1P31327 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC21.13■□□□□ 0.97
CPS1P31327 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPS1P31327 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC21.13■□□□□ 0.97
CPS1P31327 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CPS1P31327 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPS1P31327 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CPS1P31327 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPS1P31327 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CPS1P31327 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPS1P31327 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
CPS1P31327 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CPS1P31327 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC21.12■□□□□ 0.97
CPS1P31327 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPS1P31327 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPS1P31327 REXO1L5P-201ENST00000622260 2098 ntBASIC21.12■□□□□ 0.97
CPS1P31327 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CPS1P31327 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC21.12■□□□□ 0.97
CPS1P31327 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC21.12■□□□□ 0.97
CPS1P31327 AP000911.2-201ENST00000534330 502 ntBASIC21.12■□□□□ 0.97
CPS1P31327 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC21.12■□□□□ 0.97
CPS1P31327 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CPS1P31327 RN7SL470P-201ENST00000583069 259 ntBASIC21.12■□□□□ 0.97
CPS1P31327 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC21.12■□□□□ 0.97
CPS1P31327 SIGLEC18P-201ENST00000602271 909 ntBASIC21.12■□□□□ 0.97
CPS1P31327 AL627230.2-201ENST00000613254 655 ntBASIC21.12■□□□□ 0.97
CPS1P31327 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPS1P31327 KRT18P9-201ENST00000604826 1300 ntBASIC21.12■□□□□ 0.97
CPS1P31327 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPS1P31327 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPS1P31327 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPS1P31327 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPS1P31327 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPS1P31327 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC21.12■□□□□ 0.97
CPS1P31327 STK26-204ENST00000481105 1835 ntTSL 2 BASIC21.12■□□□□ 0.97
CPS1P31327 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPS1P31327 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPS1P31327 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPS1P31327 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC21.11■□□□□ 0.97
CPS1P31327 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC21.11■□□□□ 0.97
CPS1P31327 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC21.11■□□□□ 0.97
CPS1P31327 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
CPS1P31327 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPS1P31327 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CPS1P31327 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC21.11■□□□□ 0.97
CPS1P31327 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC21.11■□□□□ 0.97
CPS1P31327 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC21.11■□□□□ 0.97
CPS1P31327 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPS1P31327 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC21.11■□□□□ 0.97
CPS1P31327 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC21.11■□□□□ 0.97
CPS1P31327 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CPS1P31327 MIR6816-201ENST00000620368 66 ntBASIC21.11■□□□□ 0.97
CPS1P31327 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC21.11■□□□□ 0.97
CPS1P31327 AP001184.1-201ENST00000637936 376 ntBASIC21.11■□□□□ 0.97
CPS1P31327 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPS1P31327 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPS1P31327 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC21.11■□□□□ 0.97
CPS1P31327 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPS1P31327 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CPS1P31327 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPS1P31327 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPS1P31327 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC21.11■□□□□ 0.97
CPS1P31327 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPS1P31327 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPS1P31327 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC21.1■□□□□ 0.97
CPS1P31327 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC21.1■□□□□ 0.97
CPS1P31327 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC21.1■□□□□ 0.97
CPS1P31327 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPS1P31327 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPS1P31327 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC21.1■□□□□ 0.97
CPS1P31327 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CPS1P31327 USP4-203ENST00000415188 1454 ntTSL 3 BASIC21.1■□□□□ 0.97
CPS1P31327 AL138725.1-201ENST00000407347 1314 ntBASIC21.1■□□□□ 0.97
CPS1P31327 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CPS1P31327 MBP-201ENST00000354542 575 ntTSL 2 BASIC21.1■□□□□ 0.97
CPS1P31327 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPS1P31327 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPS1P31327 AL807761.2-201ENST00000422849 729 ntBASIC21.1■□□□□ 0.97
CPS1P31327 FAM86B3P-203ENST00000523992 854 ntBASIC21.1■□□□□ 0.97
CPS1P31327 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPS1P31327 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPS1P31327 NAMA-206ENST00000605377 509 ntTSL 5 BASIC21.1■□□□□ 0.97
CPS1P31327 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPS1P31327 INE2-201ENST00000630399 1874 ntBASIC21.1■□□□□ 0.97
CPS1P31327 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC21.1■□□□□ 0.97
CPS1P31327 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms