Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40P25942 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.23□□□□□ -0.29
CD40P25942 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.23□□□□□ -0.29
CD40P25942 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CD40P25942 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40P25942 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40P25942 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CD40P25942 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CD40P25942 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.23□□□□□ -0.29
CD40P25942 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CD40P25942 FAM21FP-201ENST00000426241 1131 ntBASIC13.23□□□□□ -0.29
CD40P25942 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
CD40P25942 FAM197Y7-201ENST00000432892 766 ntBASIC13.23□□□□□ -0.29
CD40P25942 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.23□□□□□ -0.29
CD40P25942 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.23□□□□□ -0.29
CD40P25942 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.23□□□□□ -0.29
CD40P25942 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.23□□□□□ -0.29
CD40P25942 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CD40P25942 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CD40P25942 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.23□□□□□ -0.29
CD40P25942 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.23□□□□□ -0.29
CD40P25942 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.23□□□□□ -0.29
CD40P25942 AC138951.2-201ENST00000623455 1161 ntBASIC13.23□□□□□ -0.29
CD40P25942 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.23□□□□□ -0.29
CD40P25942 AL033527.4-201ENST00000641026 673 ntBASIC13.23□□□□□ -0.29
CD40P25942 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.23□□□□□ -0.29
CD40P25942 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40P25942 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
CD40P25942 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD40P25942 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.23□□□□□ -0.29
CD40P25942 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD40P25942 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.23□□□□□ -0.29
CD40P25942 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.23□□□□□ -0.29
CD40P25942 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD40P25942 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CD40P25942 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.23□□□□□ -0.29
CD40P25942 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
CD40P25942 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40P25942 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD40P25942 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40P25942 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CD40P25942 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CD40P25942 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CD40P25942 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.22□□□□□ -0.29
CD40P25942 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CD40P25942 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.22□□□□□ -0.29
CD40P25942 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
CD40P25942 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
CD40P25942 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 AC104457.1-201ENST00000401024 814 ntBASIC13.22□□□□□ -0.29
CD40P25942 AC026954.1-201ENST00000429771 1293 ntBASIC13.22□□□□□ -0.29
CD40P25942 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.22□□□□□ -0.29
CD40P25942 YBX1P6-201ENST00000442962 1002 ntBASIC13.22□□□□□ -0.29
CD40P25942 RNA5SP412-201ENST00000516234 123 ntBASIC13.22□□□□□ -0.29
CD40P25942 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CD40P25942 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.22□□□□□ -0.29
CD40P25942 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.22□□□□□ -0.29
CD40P25942 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CD40P25942 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
CD40P25942 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CD40P25942 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.22□□□□□ -0.29
CD40P25942 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.22□□□□□ -0.29
CD40P25942 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.22□□□□□ -0.29
CD40P25942 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.22□□□□□ -0.29
CD40P25942 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CD40P25942 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CD40P25942 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CD40P25942 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40P25942 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
CD40P25942 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CD40P25942 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CD40P25942 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms