Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.53□□□□□ -0.4
APCP25054 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC12.53□□□□□ -0.4
APCP25054 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
APCP25054 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
APCP25054 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APCP25054 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
APCP25054 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.53□□□□□ -0.4
APCP25054 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
APCP25054 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APCP25054 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APCP25054 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
APCP25054 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APCP25054 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APCP25054 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APCP25054 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.53□□□□□ -0.4
APCP25054 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.53□□□□□ -0.4
APCP25054 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC12.53□□□□□ -0.4
APCP25054 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
APCP25054 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APCP25054 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.52□□□□□ -0.4
APCP25054 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APCP25054 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APCP25054 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC12.52□□□□□ -0.4
APCP25054 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
APCP25054 NAV1-210ENST00000593583 726 ntBASIC12.52□□□□□ -0.4
APCP25054 AC002044.2-201ENST00000624910 970 ntBASIC12.52□□□□□ -0.4
APCP25054 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
APCP25054 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APCP25054 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APCP25054 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APCP25054 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
APCP25054 AC092127.1-201ENST00000567093 3455 ntBASIC12.52□□□□□ -0.4
APCP25054 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
APCP25054 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APCP25054 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
APCP25054 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.52□□□□□ -0.4
APCP25054 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APCP25054 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.52□□□□□ -0.4
APCP25054 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
APCP25054 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC12.52□□□□□ -0.4
APCP25054 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APCP25054 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APCP25054 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APCP25054 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APCP25054 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APCP25054 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APCP25054 AF274858.1-201ENST00000406288 372 ntBASIC12.52□□□□□ -0.41
APCP25054 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC12.52□□□□□ -0.41
APCP25054 RBM4-207ENST00000506523 654 ntTSL 3 BASIC12.52□□□□□ -0.41
APCP25054 RNA5SP417-201ENST00000516459 108 ntBASIC12.52□□□□□ -0.41
APCP25054 FAM86B3P-203ENST00000523992 854 ntBASIC12.52□□□□□ -0.41
APCP25054 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
APCP25054 HERC2P11-201ENST00000562845 725 ntBASIC12.52□□□□□ -0.41
APCP25054 AC100756.2-201ENST00000569537 736 ntBASIC12.52□□□□□ -0.41
APCP25054 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC12.52□□□□□ -0.41
APCP25054 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APCP25054 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APCP25054 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APCP25054 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
APCP25054 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
APCP25054 AL360270.3-201ENST00000609118 1348 ntBASIC12.52□□□□□ -0.41
APCP25054 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APCP25054 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
APCP25054 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APCP25054 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
APCP25054 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC12.52□□□□□ -0.41
APCP25054 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC12.52□□□□□ -0.41
APCP25054 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APCP25054 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APCP25054 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.52□□□□□ -0.41
APCP25054 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.52□□□□□ -0.41
APCP25054 MED11-202ENST00000573708 802 ntTSL 2 BASIC12.52□□□□□ -0.41
APCP25054 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APCP25054 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.52□□□□□ -0.41
APCP25054 AC009145.4-201ENST00000625119 1294 ntBASIC12.52□□□□□ -0.41
APCP25054 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC12.51□□□□□ -0.41
APCP25054 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
APCP25054 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
APCP25054 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
APCP25054 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
APCP25054 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.51□□□□□ -0.41
APCP25054 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.51□□□□□ -0.41
APCP25054 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
APCP25054 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.51□□□□□ -0.41
APCP25054 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APCP25054 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.51□□□□□ -0.41
APCP25054 RN7SKP230-201ENST00000365642 335 ntBASIC12.51□□□□□ -0.41
APCP25054 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.51□□□□□ -0.41
APCP25054 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APCP25054 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
APCP25054 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC12.51□□□□□ -0.41
APCP25054 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.51□□□□□ -0.41
APCP25054 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APCP25054 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.51□□□□□ -0.41
APCP25054 MIR5001-201ENST00000580185 100 ntBASIC12.51□□□□□ -0.41
APCP25054 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC12.51□□□□□ -0.41
APCP25054 AC006483.2-201ENST00000609813 515 ntBASIC12.51□□□□□ -0.41
APCP25054 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.51□□□□□ -0.41
APCP25054 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
APCP25054 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms