Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.39■□□□□ 0.05
XRCC1P18887 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.39■□□□□ 0.05
XRCC1P18887 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.39■□□□□ 0.05
XRCC1P18887 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
XRCC1P18887 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.39■□□□□ 0.05
XRCC1P18887 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.39■□□□□ 0.05
XRCC1P18887 AC123567.1-201ENST00000548294 1261 ntBASIC15.39■□□□□ 0.05
XRCC1P18887 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.39■□□□□ 0.05
XRCC1P18887 AC008494.3-201ENST00000606615 944 ntBASIC15.39■□□□□ 0.05
XRCC1P18887 AL391069.4-201ENST00000609583 481 ntBASIC15.39■□□□□ 0.05
XRCC1P18887 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.39■□□□□ 0.05
XRCC1P18887 AL035252.4-201ENST00000624174 288 ntBASIC15.39■□□□□ 0.05
XRCC1P18887 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.39■□□□□ 0.05
XRCC1P18887 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.39■□□□□ 0.05
XRCC1P18887 CU639417.3-201ENST00000624240 1404 ntBASIC15.39■□□□□ 0.05
XRCC1P18887 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
XRCC1P18887 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.39■□□□□ 0.05
XRCC1P18887 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
XRCC1P18887 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.39■□□□□ 0.05
XRCC1P18887 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.39■□□□□ 0.05
XRCC1P18887 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.39■□□□□ 0.05
XRCC1P18887 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.39■□□□□ 0.05
XRCC1P18887 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
XRCC1P18887 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
XRCC1P18887 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC1P18887 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.38■□□□□ 0.05
XRCC1P18887 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC1P18887 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
XRCC1P18887 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC1P18887 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
XRCC1P18887 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.38■□□□□ 0.05
XRCC1P18887 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.38■□□□□ 0.05
XRCC1P18887 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC1P18887 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC1P18887 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
XRCC1P18887 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC1P18887 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC1P18887 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
XRCC1P18887 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.38■□□□□ 0.05
XRCC1P18887 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC1P18887 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC1P18887 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
XRCC1P18887 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
XRCC1P18887 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.38■□□□□ 0.05
XRCC1P18887 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC1P18887 COX5BP8-201ENST00000416911 349 ntBASIC15.38■□□□□ 0.05
XRCC1P18887 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.38■□□□□ 0.05
XRCC1P18887 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.38■□□□□ 0.05
XRCC1P18887 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC1P18887 MYCLP2-201ENST00000449268 967 ntBASIC15.38■□□□□ 0.05
XRCC1P18887 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.38■□□□□ 0.05
XRCC1P18887 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.38■□□□□ 0.05
XRCC1P18887 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.38■□□□□ 0.05
XRCC1P18887 AC007431.3-201ENST00000623221 587 ntBASIC15.38■□□□□ 0.05
XRCC1P18887 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.38■□□□□ 0.05
XRCC1P18887 AC005912.2-201ENST00000619492 2400 ntBASIC15.38■□□□□ 0.05
XRCC1P18887 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC1P18887 AC138969.3-201ENST00000546612 1459 ntBASIC15.38■□□□□ 0.05
XRCC1P18887 AC138932.2-201ENST00000548268 1459 ntBASIC15.38■□□□□ 0.05
XRCC1P18887 AC126755.4-201ENST00000549796 1459 ntBASIC15.38■□□□□ 0.05
XRCC1P18887 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC1P18887 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
XRCC1P18887 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.38■□□□□ 0.05
XRCC1P18887 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC1P18887 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC1P18887 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC1P18887 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.38■□□□□ 0.05
XRCC1P18887 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC1P18887 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC1P18887 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC1P18887 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
XRCC1P18887 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.37■□□□□ 0.05
XRCC1P18887 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.37■□□□□ 0.05
XRCC1P18887 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.37■□□□□ 0.05
XRCC1P18887 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
XRCC1P18887 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.37■□□□□ 0.05
XRCC1P18887 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms