Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 KLF2P4-201ENST00000451959 1225 ntBASIC16.89■□□□□ 0.29
ITGA4P13612 CTBP2P5-201ENST00000454986 1264 ntBASIC16.89■□□□□ 0.29
ITGA4P13612 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA4P13612 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.89■□□□□ 0.29
ITGA4P13612 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.89■□□□□ 0.29
ITGA4P13612 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.89■□□□□ 0.29
ITGA4P13612 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ITGA4P13612 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
ITGA4P13612 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.89■□□□□ 0.29
ITGA4P13612 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.89■□□□□ 0.29
ITGA4P13612 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.89■□□□□ 0.29
ITGA4P13612 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.89■□□□□ 0.29
ITGA4P13612 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.89■□□□□ 0.29
ITGA4P13612 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.89■□□□□ 0.29
ITGA4P13612 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA4P13612 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.89■□□□□ 0.29
ITGA4P13612 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA4P13612 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
ITGA4P13612 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA4P13612 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.89■□□□□ 0.29
ITGA4P13612 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.89■□□□□ 0.29
ITGA4P13612 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ITGA4P13612 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
ITGA4P13612 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA4P13612 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA4P13612 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.89■□□□□ 0.29
ITGA4P13612 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA4P13612 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ITGA4P13612 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA4P13612 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA4P13612 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA4P13612 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ITGA4P13612 AC092127.1-201ENST00000567093 3455 ntBASIC16.89■□□□□ 0.29
ITGA4P13612 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA4P13612 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.88■□□□□ 0.29
ITGA4P13612 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA4P13612 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.88■□□□□ 0.29
ITGA4P13612 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.88■□□□□ 0.29
ITGA4P13612 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA4P13612 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA4P13612 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA4P13612 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA4P13612 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA4P13612 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.88■□□□□ 0.29
ITGA4P13612 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA4P13612 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
ITGA4P13612 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA4P13612 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA4P13612 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA4P13612 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA4P13612 AC012441.1-201ENST00000446669 685 ntBASIC16.88■□□□□ 0.29
ITGA4P13612 AP001582.1-201ENST00000525856 295 ntBASIC16.88■□□□□ 0.29
ITGA4P13612 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
ITGA4P13612 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.88■□□□□ 0.29
ITGA4P13612 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.88■□□□□ 0.29
ITGA4P13612 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.88■□□□□ 0.29
ITGA4P13612 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA4P13612 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.88■□□□□ 0.29
ITGA4P13612 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA4P13612 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA4P13612 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA4P13612 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.88■□□□□ 0.29
ITGA4P13612 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA4P13612 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ITGA4P13612 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA4P13612 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA4P13612 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ITGA4P13612 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ITGA4P13612 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA4P13612 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA4P13612 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA4P13612 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.87■□□□□ 0.29
ITGA4P13612 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA4P13612 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA4P13612 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA4P13612 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.87■□□□□ 0.29
ITGA4P13612 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA4P13612 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA4P13612 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ITGA4P13612 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA4P13612 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA4P13612 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA4P13612 AC087481.3-201ENST00000602886 1894 ntBASIC16.87■□□□□ 0.29
ITGA4P13612 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA4P13612 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA4P13612 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA4P13612 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA4P13612 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA4P13612 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA4P13612 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ITGA4P13612 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ITGA4P13612 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ITGA4P13612 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.87■□□□□ 0.29
ITGA4P13612 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.87■□□□□ 0.29
ITGA4P13612 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.87■□□□□ 0.29
ITGA4P13612 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.87■□□□□ 0.29
ITGA4P13612 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.87■□□□□ 0.29
ITGA4P13612 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.87■□□□□ 0.29
ITGA4P13612 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.87■□□□□ 0.29
ITGA4P13612 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms