Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SCG2P13521 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.65■□□□□ 0.42
SCG2P13521 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCG2P13521 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.65■□□□□ 0.42
SCG2P13521 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SCG2P13521 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SCG2P13521 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCG2P13521 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCG2P13521 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCG2P13521 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.65■□□□□ 0.42
SCG2P13521 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SCG2P13521 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCG2P13521 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCG2P13521 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.65■□□□□ 0.42
SCG2P13521 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCG2P13521 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.65■□□□□ 0.42
SCG2P13521 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.65■□□□□ 0.42
SCG2P13521 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.65■□□□□ 0.42
SCG2P13521 ACTG1P3-201ENST00000431775 1114 ntBASIC17.65■□□□□ 0.42
SCG2P13521 ATP5G2P4-201ENST00000442175 420 ntBASIC17.65■□□□□ 0.42
SCG2P13521 AC093433.1-201ENST00000458048 571 ntBASIC17.65■□□□□ 0.42
SCG2P13521 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.65■□□□□ 0.42
SCG2P13521 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SCG2P13521 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCG2P13521 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCG2P13521 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.65■□□□□ 0.42
SCG2P13521 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.65■□□□□ 0.42
SCG2P13521 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.65■□□□□ 0.42
SCG2P13521 AP005019.2-201ENST00000615104 511 ntBASIC17.65■□□□□ 0.42
SCG2P13521 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCG2P13521 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCG2P13521 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCG2P13521 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCG2P13521 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.65■□□□□ 0.42
SCG2P13521 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCG2P13521 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCG2P13521 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SCG2P13521 REXO1L5P-201ENST00000622260 2098 ntBASIC17.65■□□□□ 0.42
SCG2P13521 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCG2P13521 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.65■□□□□ 0.42
SCG2P13521 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SCG2P13521 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SCG2P13521 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
SCG2P13521 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCG2P13521 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCG2P13521 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.64■□□□□ 0.41
SCG2P13521 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.64■□□□□ 0.41
SCG2P13521 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCG2P13521 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.64■□□□□ 0.41
SCG2P13521 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCG2P13521 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.64■□□□□ 0.41
SCG2P13521 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCG2P13521 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCG2P13521 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCG2P13521 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SCG2P13521 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.64■□□□□ 0.41
SCG2P13521 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SCG2P13521 AL139094.1-201ENST00000405549 1188 ntBASIC17.64■□□□□ 0.41
SCG2P13521 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.64■□□□□ 0.41
SCG2P13521 ARSEP1-201ENST00000420443 635 ntBASIC17.64■□□□□ 0.41
SCG2P13521 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.64■□□□□ 0.41
SCG2P13521 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCG2P13521 GPR53P-205ENST00000457298 1084 ntBASIC17.64■□□□□ 0.41
SCG2P13521 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCG2P13521 GIMAP3P-201ENST00000495150 836 ntBASIC17.64■□□□□ 0.41
SCG2P13521 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.64■□□□□ 0.41
SCG2P13521 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SCG2P13521 AC009486.1-201ENST00000569860 813 ntBASIC17.64■□□□□ 0.41
SCG2P13521 MIR5189-201ENST00000577370 114 ntBASIC17.64■□□□□ 0.41
SCG2P13521 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SCG2P13521 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.64■□□□□ 0.41
SCG2P13521 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCG2P13521 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SCG2P13521 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCG2P13521 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCG2P13521 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SCG2P13521 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SCG2P13521 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SCG2P13521 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.64■□□□□ 0.41
SCG2P13521 AC006058.4-201ENST00000624016 1670 ntBASIC17.64■□□□□ 0.41
SCG2P13521 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.64■□□□□ 0.41
SCG2P13521 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG2P13521 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG2P13521 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
SCG2P13521 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG2P13521 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG2P13521 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG2P13521 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.63■□□□□ 0.41
SCG2P13521 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SCG2P13521 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG2P13521 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.63■□□□□ 0.41
SCG2P13521 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.63■□□□□ 0.41
SCG2P13521 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.63■□□□□ 0.41
SCG2P13521 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG2P13521 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.63■□□□□ 0.41
SCG2P13521 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SCG2P13521 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
SCG2P13521 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SCG2P13521 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SCG2P13521 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms