Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTNSO60931 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CTNSO60931 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTNSO60931 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTNSO60931 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTNSO60931 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.41□□□□□ -0.1
CTNSO60931 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTNSO60931 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CTNSO60931 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
CTNSO60931 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.41□□□□□ -0.1
CTNSO60931 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.41□□□□□ -0.1
CTNSO60931 AC114812.1-204ENST00000449669 728 ntBASIC14.41□□□□□ -0.1
CTNSO60931 INE1-201ENST00000456273 945 ntBASIC14.41□□□□□ -0.1
CTNSO60931 RN7SL837P-201ENST00000463010 287 ntBASIC14.41□□□□□ -0.1
CTNSO60931 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.41□□□□□ -0.1
CTNSO60931 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CTNSO60931 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.41□□□□□ -0.1
CTNSO60931 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.41□□□□□ -0.1
CTNSO60931 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.41□□□□□ -0.1
CTNSO60931 AP005019.2-201ENST00000615104 511 ntBASIC14.41□□□□□ -0.1
CTNSO60931 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.41□□□□□ -0.1
CTNSO60931 WASH3P-207ENST00000560956 1394 ntBASIC14.41□□□□□ -0.1
CTNSO60931 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
CTNSO60931 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTNSO60931 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
CTNSO60931 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CTNSO60931 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTNSO60931 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTNSO60931 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CTNSO60931 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.41□□□□□ -0.1
CTNSO60931 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTNSO60931 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CTNSO60931 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTNSO60931 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTNSO60931 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CTNSO60931 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTNSO60931 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTNSO60931 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CTNSO60931 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CTNSO60931 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CTNSO60931 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.41□□□□□ -0.1
CTNSO60931 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
CTNSO60931 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTNSO60931 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CTNSO60931 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.4□□□□□ -0.1
CTNSO60931 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CTNSO60931 AL512384.1-201ENST00000406683 331 ntBASIC14.4□□□□□ -0.1
CTNSO60931 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CTNSO60931 AC007389.4-201ENST00000454674 793 ntBASIC14.4□□□□□ -0.1
CTNSO60931 AC093433.1-201ENST00000458048 571 ntBASIC14.4□□□□□ -0.1
CTNSO60931 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.4□□□□□ -0.1
CTNSO60931 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CTNSO60931 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.4□□□□□ -0.1
CTNSO60931 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.4□□□□□ -0.1
CTNSO60931 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.4□□□□□ -0.1
CTNSO60931 AC010319.3-201ENST00000597028 470 ntBASIC14.4□□□□□ -0.1
CTNSO60931 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.4□□□□□ -0.1
CTNSO60931 AC012645.4-201ENST00000610691 1061 ntBASIC14.4□□□□□ -0.1
CTNSO60931 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.4□□□□□ -0.1
CTNSO60931 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTNSO60931 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTNSO60931 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTNSO60931 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CTNSO60931 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.4□□□□□ -0.1
CTNSO60931 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CTNSO60931 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.4□□□□□ -0.1
CTNSO60931 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CTNSO60931 AL158070.2-201ENST00000623713 1621 ntBASIC14.4□□□□□ -0.1
CTNSO60931 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTNSO60931 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CTNSO60931 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.4□□□□□ -0.1
CTNSO60931 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTNSO60931 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.4□□□□□ -0.1
CTNSO60931 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.4□□□□□ -0.1
CTNSO60931 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CTNSO60931 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CTNSO60931 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.4□□□□□ -0.1
CTNSO60931 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTNSO60931 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CTNSO60931 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CTNSO60931 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CTNSO60931 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CTNSO60931 AC006058.4-201ENST00000624016 1670 ntBASIC14.39□□□□□ -0.11
CTNSO60931 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTNSO60931 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CTNSO60931 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CTNSO60931 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTNSO60931 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CTNSO60931 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.39□□□□□ -0.11
CTNSO60931 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CTNSO60931 AC023157.3-201ENST00000619086 2088 ntBASIC14.39□□□□□ -0.11
CTNSO60931 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.39□□□□□ -0.11
CTNSO60931 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CTNSO60931 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CTNSO60931 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.39□□□□□ -0.11
CTNSO60931 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.39□□□□□ -0.11
CTNSO60931 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CTNSO60931 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CTNSO60931 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.39□□□□□ -0.11
CTNSO60931 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms