Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC10.59□□□□□ -0.71
NDUFA1O15239 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
NDUFA1O15239 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
NDUFA1O15239 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 PCDHGB8P-201ENST00000502926 1973 ntBASIC10.59□□□□□ -0.71
NDUFA1O15239 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
NDUFA1O15239 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC10.59□□□□□ -0.71
NDUFA1O15239 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
NDUFA1O15239 BSG-215ENST00000618006 1329 ntTSL 2 BASIC10.58□□□□□ -0.71
NDUFA1O15239 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
NDUFA1O15239 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
NDUFA1O15239 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 AL359183.1-201ENST00000623796 2132 ntBASIC10.58□□□□□ -0.72
NDUFA1O15239 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
NDUFA1O15239 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
NDUFA1O15239 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 AL031595.1-201ENST00000623969 4709 ntBASIC10.58□□□□□ -0.72
NDUFA1O15239 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
NDUFA1O15239 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
NDUFA1O15239 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 NEK7-201ENST00000367383 586 ntTSL 2 BASIC10.58□□□□□ -0.72
NDUFA1O15239 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 CBR1-202ENST00000399191 838 ntTSL 3 BASIC10.58□□□□□ -0.72
NDUFA1O15239 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC10.58□□□□□ -0.72
NDUFA1O15239 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC10.58□□□□□ -0.72
NDUFA1O15239 AC007967.2-201ENST00000432613 625 ntBASIC10.58□□□□□ -0.72
NDUFA1O15239 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC10.58□□□□□ -0.72
NDUFA1O15239 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC10.58□□□□□ -0.72
NDUFA1O15239 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC10.58□□□□□ -0.72
NDUFA1O15239 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC10.58□□□□□ -0.72
NDUFA1O15239 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC10.58□□□□□ -0.72
NDUFA1O15239 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC10.58□□□□□ -0.72
NDUFA1O15239 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC10.58□□□□□ -0.72
NDUFA1O15239 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC10.58□□□□□ -0.72
NDUFA1O15239 TET3-201ENST00000305799 5174 ntTSL 5 BASIC10.58□□□□□ -0.72
NDUFA1O15239 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC10.58□□□□□ -0.72
NDUFA1O15239 AC113367.3-201ENST00000508316 1912 ntBASIC10.58□□□□□ -0.72
NDUFA1O15239 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC10.58□□□□□ -0.72
NDUFA1O15239 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC10.58□□□□□ -0.72
NDUFA1O15239 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
NDUFA1O15239 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
NDUFA1O15239 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
NDUFA1O15239 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC10.57□□□□□ -0.72
NDUFA1O15239 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 BNIP3P1-202ENST00000550043 1585 ntBASIC10.57□□□□□ -0.72
NDUFA1O15239 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
NDUFA1O15239 TP73-201ENST00000346387 4854 ntTSL 5 BASIC10.57□□□□□ -0.72
NDUFA1O15239 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms