Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
CUX2O14529 AC124067.4-201ENST00000519691 2379 ntBASIC25.56■■□□□ 1.68
CUX2O14529 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
CUX2O14529 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
CUX2O14529 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC25.56■■□□□ 1.68
CUX2O14529 SP100-205ENST00000409824 1802 ntTSL 5 BASIC25.56■■□□□ 1.68
CUX2O14529 AC055811.4-201ENST00000624039 1754 ntBASIC25.56■■□□□ 1.68
CUX2O14529 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CUX2O14529 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC25.56■■□□□ 1.68
CUX2O14529 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
CUX2O14529 FZD10-202ENST00000539839 3282 ntBASIC25.56■■□□□ 1.68
CUX2O14529 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC25.56■■□□□ 1.68
CUX2O14529 PGR-209ENST00000617858 2816 ntTSL 5 BASIC25.56■■□□□ 1.68
CUX2O14529 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC25.56■■□□□ 1.68
CUX2O14529 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CUX2O14529 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CUX2O14529 PPIA-208ENST00000489459 907 ntTSL 2 BASIC25.56■■□□□ 1.68
CUX2O14529 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC25.56■■□□□ 1.68
CUX2O14529 PPIA-210ENST00000620047 827 ntTSL 5 BASIC25.56■■□□□ 1.68
CUX2O14529 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CUX2O14529 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CUX2O14529 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC25.56■■□□□ 1.68
CUX2O14529 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC25.56■■□□□ 1.68
CUX2O14529 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC25.56■■□□□ 1.68
CUX2O14529 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CUX2O14529 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CUX2O14529 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CUX2O14529 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CUX2O14529 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC25.55■■□□□ 1.68
CUX2O14529 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC25.55■■□□□ 1.68
CUX2O14529 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CUX2O14529 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CUX2O14529 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CUX2O14529 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CUX2O14529 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC25.55■■□□□ 1.68
CUX2O14529 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC25.55■■□□□ 1.68
CUX2O14529 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CUX2O14529 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CUX2O14529 HLA-K-203ENST00000430151 1046 ntBASIC25.55■■□□□ 1.68
CUX2O14529 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC25.55■■□□□ 1.68
CUX2O14529 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC25.55■■□□□ 1.68
CUX2O14529 AC140113.1-201ENST00000603467 169 ntBASIC25.55■■□□□ 1.68
CUX2O14529 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CUX2O14529 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CUX2O14529 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC25.55■■□□□ 1.68
CUX2O14529 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
CUX2O14529 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
CUX2O14529 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
CUX2O14529 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CUX2O14529 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC25.54■■□□□ 1.68
CUX2O14529 AC069224.1-201ENST00000566372 1715 ntBASIC25.54■■□□□ 1.68
CUX2O14529 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
CUX2O14529 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CUX2O14529 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
CUX2O14529 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC25.54■■□□□ 1.68
CUX2O14529 PFN2-205ENST00000461868 613 ntTSL 2 BASIC25.54■■□□□ 1.68
CUX2O14529 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC25.54■■□□□ 1.68
CUX2O14529 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC25.54■■□□□ 1.68
CUX2O14529 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CUX2O14529 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
CUX2O14529 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
CUX2O14529 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CUX2O14529 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CUX2O14529 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CUX2O14529 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CUX2O14529 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CUX2O14529 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
CUX2O14529 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CUX2O14529 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CUX2O14529 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC25.54■■□□□ 1.68
CUX2O14529 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
CUX2O14529 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
CUX2O14529 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CUX2O14529 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CUX2O14529 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC25.53■■□□□ 1.68
CUX2O14529 BCRP4-201ENST00000506079 804 ntBASIC25.53■■□□□ 1.68
CUX2O14529 AC093826.1-201ENST00000508655 993 ntBASIC25.53■■□□□ 1.68
CUX2O14529 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC25.53■■□□□ 1.68
CUX2O14529 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
CUX2O14529 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CUX2O14529 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CUX2O14529 AC136759.1-202ENST00000530858 2194 ntBASIC25.53■■□□□ 1.68
CUX2O14529 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CUX2O14529 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CUX2O14529 AR-207ENST00000612010 3896 ntTSL 5 BASIC25.53■■□□□ 1.68
CUX2O14529 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CUX2O14529 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
CUX2O14529 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CUX2O14529 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
CUX2O14529 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
CUX2O14529 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CUX2O14529 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
CUX2O14529 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
CUX2O14529 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CUX2O14529 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
CUX2O14529 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CUX2O14529 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC25.53■■□□□ 1.68
CUX2O14529 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
CUX2O14529 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CUX2O14529 AC092580.1-201ENST00000433998 658 ntBASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms