Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AL033527.5-202ENST00000641632 1098 ntBASIC16.37■□□□□ 0.21
RCCD1A6NED2 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RCCD1A6NED2 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RCCD1A6NED2 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RCCD1A6NED2 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RCCD1A6NED2 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RCCD1A6NED2 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RCCD1A6NED2 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RCCD1A6NED2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RCCD1A6NED2 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RCCD1A6NED2 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RCCD1A6NED2 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RCCD1A6NED2 LILRP1-201ENST00000444199 1370 ntBASIC16.37■□□□□ 0.21
RCCD1A6NED2 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RCCD1A6NED2 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RCCD1A6NED2 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 AC015802.1-201ENST00000588104 1449 ntBASIC16.36■□□□□ 0.21
RCCD1A6NED2 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.36■□□□□ 0.21
RCCD1A6NED2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.36■□□□□ 0.21
RCCD1A6NED2 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RCCD1A6NED2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.36■□□□□ 0.21
RCCD1A6NED2 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.36■□□□□ 0.21
RCCD1A6NED2 RPL37AP1-201ENST00000412502 279 ntBASIC16.36■□□□□ 0.21
RCCD1A6NED2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.36■□□□□ 0.21
RCCD1A6NED2 AC015922.1-201ENST00000421102 1152 ntBASIC16.36■□□□□ 0.21
RCCD1A6NED2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.36■□□□□ 0.21
RCCD1A6NED2 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.36■□□□□ 0.21
RCCD1A6NED2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.36■□□□□ 0.21
RCCD1A6NED2 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.36■□□□□ 0.21
RCCD1A6NED2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.36■□□□□ 0.21
RCCD1A6NED2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.36■□□□□ 0.21
RCCD1A6NED2 AC005829.1-201ENST00000570002 483 ntBASIC16.36■□□□□ 0.21
RCCD1A6NED2 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.36■□□□□ 0.21
RCCD1A6NED2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.36■□□□□ 0.21
RCCD1A6NED2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.36■□□□□ 0.21
RCCD1A6NED2 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.36■□□□□ 0.21
RCCD1A6NED2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
RCCD1A6NED2 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RCCD1A6NED2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
RCCD1A6NED2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCCD1A6NED2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.36■□□□□ 0.21
RCCD1A6NED2 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCCD1A6NED2 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RCCD1A6NED2 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RCCD1A6NED2 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCCD1A6NED2 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCCD1A6NED2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCCD1A6NED2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RCCD1A6NED2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCCD1A6NED2 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.35■□□□□ 0.21
RCCD1A6NED2 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCCD1A6NED2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
RCCD1A6NED2 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCCD1A6NED2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCCD1A6NED2 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCCD1A6NED2 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
RCCD1A6NED2 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.35■□□□□ 0.21
RCCD1A6NED2 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RCCD1A6NED2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RCCD1A6NED2 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RCCD1A6NED2 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RCCD1A6NED2 COA4-204ENST00000541455 1038 ntTSL 5 BASIC16.35■□□□□ 0.21
RCCD1A6NED2 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC16.35■□□□□ 0.21
RCCD1A6NED2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.35■□□□□ 0.21
RCCD1A6NED2 AL589739.1-201ENST00000607720 493 ntBASIC16.35■□□□□ 0.21
RCCD1A6NED2 AC010327.5-201ENST00000586923 3061 ntBASIC16.35■□□□□ 0.21
RCCD1A6NED2 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCCD1A6NED2 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCCD1A6NED2 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RCCD1A6NED2 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RCCD1A6NED2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCCD1A6NED2 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms