Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SBNO1A3KN83 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SBNO1A3KN83 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
SBNO1A3KN83 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.46■□□□□ 0.87
SBNO1A3KN83 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SBNO1A3KN83 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.46■□□□□ 0.87
SBNO1A3KN83 AL360270.3-201ENST00000609118 1348 ntBASIC20.46■□□□□ 0.87
SBNO1A3KN83 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SBNO1A3KN83 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SBNO1A3KN83 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.46■□□□□ 0.87
SBNO1A3KN83 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
SBNO1A3KN83 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC20.46■□□□□ 0.87
SBNO1A3KN83 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SBNO1A3KN83 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SBNO1A3KN83 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SBNO1A3KN83 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC20.46■□□□□ 0.87
SBNO1A3KN83 RN7SKP230-201ENST00000365642 335 ntBASIC20.46■□□□□ 0.87
SBNO1A3KN83 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC20.46■□□□□ 0.87
SBNO1A3KN83 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC20.46■□□□□ 0.87
SBNO1A3KN83 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC20.46■□□□□ 0.87
SBNO1A3KN83 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SBNO1A3KN83 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SBNO1A3KN83 AC008805.1-201ENST00000590892 364 ntBASIC20.46■□□□□ 0.87
SBNO1A3KN83 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SBNO1A3KN83 MIR6842-201ENST00000612539 65 ntBASIC20.46■□□□□ 0.87
SBNO1A3KN83 AP001065.2-201ENST00000617205 644 ntBASIC20.46■□□□□ 0.87
SBNO1A3KN83 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SBNO1A3KN83 RPL35-206ENST00000629845 340 ntTSL 5 BASIC20.46■□□□□ 0.87
SBNO1A3KN83 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SBNO1A3KN83 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SBNO1A3KN83 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SBNO1A3KN83 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SBNO1A3KN83 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SBNO1A3KN83 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SBNO1A3KN83 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC20.45■□□□□ 0.86
SBNO1A3KN83 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC20.45■□□□□ 0.86
SBNO1A3KN83 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC20.45■□□□□ 0.86
SBNO1A3KN83 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
SBNO1A3KN83 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SBNO1A3KN83 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
SBNO1A3KN83 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SBNO1A3KN83 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SBNO1A3KN83 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SBNO1A3KN83 OR2K2-202ENST00000374428 1038 ntBASIC20.45■□□□□ 0.86
SBNO1A3KN83 AL627231.1-201ENST00000394467 1125 ntBASIC20.45■□□□□ 0.86
SBNO1A3KN83 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC20.45■□□□□ 0.86
SBNO1A3KN83 RN7SL67P-201ENST00000492147 296 ntBASIC20.45■□□□□ 0.86
SBNO1A3KN83 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC20.45■□□□□ 0.86
SBNO1A3KN83 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC20.45■□□□□ 0.86
SBNO1A3KN83 POU5F1P2-201ENST00000521750 823 ntBASIC20.45■□□□□ 0.86
SBNO1A3KN83 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SBNO1A3KN83 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC20.45■□□□□ 0.86
SBNO1A3KN83 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC20.45■□□□□ 0.86
SBNO1A3KN83 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SBNO1A3KN83 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC20.45■□□□□ 0.86
SBNO1A3KN83 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC20.45■□□□□ 0.86
SBNO1A3KN83 AC103810.10-201ENST00000606504 343 ntBASIC20.45■□□□□ 0.86
SBNO1A3KN83 AL513523.2-202ENST00000427283 2040 ntBASIC20.45■□□□□ 0.86
SBNO1A3KN83 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SBNO1A3KN83 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
SBNO1A3KN83 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SBNO1A3KN83 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SBNO1A3KN83 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SBNO1A3KN83 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SBNO1A3KN83 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SBNO1A3KN83 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SBNO1A3KN83 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SBNO1A3KN83 AC074138.1-201ENST00000611182 1303 ntBASIC20.44■□□□□ 0.86
SBNO1A3KN83 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SBNO1A3KN83 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SBNO1A3KN83 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SBNO1A3KN83 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SBNO1A3KN83 ZBTB45P1-201ENST00000452761 1456 ntBASIC20.44■□□□□ 0.86
SBNO1A3KN83 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SBNO1A3KN83 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SBNO1A3KN83 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SBNO1A3KN83 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SBNO1A3KN83 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SBNO1A3KN83 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SBNO1A3KN83 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SBNO1A3KN83 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC20.44■□□□□ 0.86
SBNO1A3KN83 SCARNA21-201ENST00000517026 139 ntBASIC20.44■□□□□ 0.86
SBNO1A3KN83 CCNC-217ENST00000523985 958 ntTSL 2 BASIC20.44■□□□□ 0.86
SBNO1A3KN83 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC20.44■□□□□ 0.86
SBNO1A3KN83 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC20.44■□□□□ 0.86
SBNO1A3KN83 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC20.44■□□□□ 0.86
SBNO1A3KN83 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SBNO1A3KN83 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SBNO1A3KN83 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SBNO1A3KN83 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SBNO1A3KN83 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC20.43■□□□□ 0.86
SBNO1A3KN83 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.43■□□□□ 0.86
SBNO1A3KN83 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
SBNO1A3KN83 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
SBNO1A3KN83 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SBNO1A3KN83 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
SBNO1A3KN83 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SBNO1A3KN83 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SBNO1A3KN83 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC20.43■□□□□ 0.86
SBNO1A3KN83 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms