Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SHISA3A0PJX4 AC016397.2-201ENST00000624848 1985 ntBASIC13.41□□□□□ -0.26
SHISA3A0PJX4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 AKAP8P1-201ENST00000434743 1349 ntBASIC13.41□□□□□ -0.26
SHISA3A0PJX4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 TARDBPP1-201ENST00000442013 1203 ntBASIC13.41□□□□□ -0.26
SHISA3A0PJX4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 AC079776.4-201ENST00000511039 504 ntBASIC13.41□□□□□ -0.26
SHISA3A0PJX4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 PDPK2P-202ENST00000562415 1191 ntBASIC13.41□□□□□ -0.26
SHISA3A0PJX4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 AC026979.3-201ENST00000607315 403 ntBASIC13.41□□□□□ -0.26
SHISA3A0PJX4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 AL773604.1-201ENST00000617417 272 ntBASIC13.41□□□□□ -0.26
SHISA3A0PJX4 AL513190.1-201ENST00000621254 727 ntBASIC13.41□□□□□ -0.26
SHISA3A0PJX4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 AL354702.1-201ENST00000442006 1960 ntBASIC13.41□□□□□ -0.26
SHISA3A0PJX4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.41□□□□□ -0.26
SHISA3A0PJX4 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 C8orf49-201ENST00000525043 1968 ntBASIC13.4□□□□□ -0.26
SHISA3A0PJX4 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 TFAMP1-201ENST00000412727 736 ntBASIC13.4□□□□□ -0.26
SHISA3A0PJX4 AL355306.1-201ENST00000415580 579 ntBASIC13.4□□□□□ -0.26
SHISA3A0PJX4 AC074338.1-201ENST00000416825 156 ntBASIC13.4□□□□□ -0.26
SHISA3A0PJX4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 AC112191.1-201ENST00000523689 701 ntBASIC13.4□□□□□ -0.26
SHISA3A0PJX4 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SHISA3A0PJX4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
SHISA3A0PJX4 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.4□□□□□ -0.27
SHISA3A0PJX4 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.4□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms