Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PCDHB1Q9Y5F3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 AC023024.2-201ENST00000623561 1993 ntBASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 BOLA2P3-201ENST00000404566 256 ntBASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 USP32P1-208ENST00000506594 1164 ntBASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 RARRES2P5-201ENST00000564013 466 ntBASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 BTNL10-201ENST00000595971 695 ntBASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 AC000095.1-201ENST00000603208 874 ntBASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHB1Q9Y5F3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
PCDHB1Q9Y5F3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 AC018665.1-201ENST00000622927 1362 ntBASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 AC084346.2-201ENST00000607097 949 ntBASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 GPR182-203ENST00000622922 591 ntBASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 AC144831.1-201ENST00000573312 2656 ntBASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHB1Q9Y5F3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHB1Q9Y5F3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms