Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 RBM38-204ENST00000371219 760 ntTSL 2 BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 RBM8B-201ENST00000555532 525 ntBASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 RN7SL596P-201ENST00000582123 288 ntBASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 AC005632.3-201ENST00000605544 308 ntBASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 AC007881.3-201ENST00000608897 607 ntBASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZC3H4Q9UPT8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 PKD1P1-201ENST00000458669 6805 ntBASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 CLUHP2-201ENST00000426660 1303 ntBASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 NAGK-204ENST00000443872 878 ntTSL 3 BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 CDC23-208ENST00000505120 455 ntTSL 3 BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 AL358472.3-201ENST00000608147 415 ntBASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 MIR6858-201ENST00000620733 67 ntBASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 AL132780.4-201ENST00000624870 1135 ntBASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZC3H4Q9UPT8 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ZC3H4Q9UPT8 AC011477.6-201ENST00000604980 1927 ntBASIC18.39■□□□□ 0.54
ZC3H4Q9UPT8 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ZC3H4Q9UPT8 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.39■□□□□ 0.53
ZC3H4Q9UPT8 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
ZC3H4Q9UPT8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
ZC3H4Q9UPT8 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H4Q9UPT8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H4Q9UPT8 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H4Q9UPT8 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H4Q9UPT8 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.39■□□□□ 0.53
ZC3H4Q9UPT8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H4Q9UPT8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H4Q9UPT8 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H4Q9UPT8 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.39■□□□□ 0.53
ZC3H4Q9UPT8 MST1L-201ENST00000442552 2185 ntBASIC18.39■□□□□ 0.53
ZC3H4Q9UPT8 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H4Q9UPT8 AP000356.3-201ENST00000382243 753 ntBASIC18.39■□□□□ 0.53
ZC3H4Q9UPT8 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZC3H4Q9UPT8 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC18.39■□□□□ 0.53
ZC3H4Q9UPT8 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms