Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDZRN3Q9UPQ7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDZRN3Q9UPQ7 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC19.83■□□□□ 0.77
PDZRN3Q9UPQ7 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDZRN3Q9UPQ7 TPI1-206ENST00000488464 791 ntTSL 5 BASIC19.83■□□□□ 0.77
PDZRN3Q9UPQ7 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDZRN3Q9UPQ7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC19.83■□□□□ 0.77
PDZRN3Q9UPQ7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
PDZRN3Q9UPQ7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC19.83■□□□□ 0.76
PDZRN3Q9UPQ7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDZRN3Q9UPQ7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDZRN3Q9UPQ7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDZRN3Q9UPQ7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDZRN3Q9UPQ7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.83■□□□□ 0.76
PDZRN3Q9UPQ7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
PDZRN3Q9UPQ7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
PDZRN3Q9UPQ7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDZRN3Q9UPQ7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC19.83■□□□□ 0.76
PDZRN3Q9UPQ7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDZRN3Q9UPQ7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 AC099548.2-209ENST00000480264 625 ntBASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 AP001063.1-201ENST00000568332 529 ntBASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 RHOXF1P1-202ENST00000635473 501 ntBASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDZRN3Q9UPQ7 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 AC092506.1-202ENST00000401022 528 ntBASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 AZGP1P1-201ENST00000411909 902 ntBASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 AC012441.1-201ENST00000446669 685 ntBASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 KRT8P13-201ENST00000463294 1010 ntBASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 AC120045.2-201ENST00000567334 178 ntBASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 MIR3615-201ENST00000581999 87 ntBASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 AC008687.7-202ENST00000637404 953 ntBASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDZRN3Q9UPQ7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDZRN3Q9UPQ7 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms