Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 AC233724.9-201ENST00000511694 407 ntBASIC6.04□□□□□ -1.44
MACF1Q9UPN3 FOS-205ENST00000555242 629 ntTSL 2 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 AC079414.2-201ENST00000567157 1104 ntBASIC6.04□□□□□ -1.44
MACF1Q9UPN3 MYL12A-206ENST00000578611 1004 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 AC012313.2-201ENST00000599952 1154 ntTSL 5 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 FAM230A-201ENST00000615181 315 ntTSL 5 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 TPT1P9-201ENST00000413759 514 ntBASIC6.04□□□□□ -1.44
MACF1Q9UPN3 IL6RP1-201ENST00000417848 1273 ntBASIC6.04□□□□□ -1.44
MACF1Q9UPN3 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 PRDX3P2-201ENST00000447051 611 ntBASIC6.04□□□□□ -1.44
MACF1Q9UPN3 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 PPP4R1L-201ENST00000244070 1474 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 FAM226B-201ENST00000602508 1490 ntBASIC6.04□□□□□ -1.44
MACF1Q9UPN3 AL591499.1-201ENST00000307155 1153 ntBASIC6.04□□□□□ -1.44
MACF1Q9UPN3 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 AC139143.1-201ENST00000441772 1207 ntBASIC6.04□□□□□ -1.44
MACF1Q9UPN3 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 SPATA24-204ENST00000507779 606 ntTSL 5 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 RHEB-207ENST00000496004 744 ntTSL 2 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 AC121757.1-201ENST00000552441 624 ntTSL 5 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 AC090616.6-202ENST00000583601 1088 ntBASIC6.04□□□□□ -1.44
MACF1Q9UPN3 REXO1L5P-201ENST00000622260 2098 ntBASIC6.04□□□□□ -1.44
MACF1Q9UPN3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 AP000593.2-201ENST00000542775 1433 ntBASIC6.04□□□□□ -1.44
MACF1Q9UPN3 KRT18P45-201ENST00000515347 1333 ntBASIC6.04□□□□□ -1.44
MACF1Q9UPN3 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 RNA5SP406-201ENST00000516106 112 ntBASIC6.04□□□□□ -1.44
MACF1Q9UPN3 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 AC091691.1-201ENST00000583587 1018 ntBASIC6.04□□□□□ -1.44
MACF1Q9UPN3 GGNBP1-204ENST00000613113 887 ntBASIC6.04□□□□□ -1.44
MACF1Q9UPN3 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
MACF1Q9UPN3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
MACF1Q9UPN3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
MACF1Q9UPN3 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC6.03□□□□□ -1.44
MACF1Q9UPN3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC6.03□□□□□ -1.44
MACF1Q9UPN3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
MACF1Q9UPN3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
MACF1Q9UPN3 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
MACF1Q9UPN3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC6.03□□□□□ -1.44
MACF1Q9UPN3 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC6.03□□□□□ -1.44
MACF1Q9UPN3 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC6.03□□□□□ -1.44
MACF1Q9UPN3 RPL10P8-201ENST00000522888 313 ntBASIC6.03□□□□□ -1.44
MACF1Q9UPN3 KRT8P34-201ENST00000577607 1044 ntBASIC6.03□□□□□ -1.44
MACF1Q9UPN3 AC069366.2-201ENST00000583643 430 ntBASIC6.03□□□□□ -1.44
MACF1Q9UPN3 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC6.03□□□□□ -1.44
MACF1Q9UPN3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
MACF1Q9UPN3 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC6.03□□□□□ -1.44
MACF1Q9UPN3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
MACF1Q9UPN3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC6.03□□□□□ -1.44
MACF1Q9UPN3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
MACF1Q9UPN3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
MACF1Q9UPN3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
MACF1Q9UPN3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC6.03□□□□□ -1.44
MACF1Q9UPN3 PHBP3-201ENST00000412562 819 ntBASIC6.03□□□□□ -1.44
MACF1Q9UPN3 TAC3-205ENST00000415231 588 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
MACF1Q9UPN3 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC6.03□□□□□ -1.44
MACF1Q9UPN3 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC6.03□□□□□ -1.44
MACF1Q9UPN3 SNHG15-210ENST00000585030 953 ntTSL 3 BASIC6.03□□□□□ -1.44
MACF1Q9UPN3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
MACF1Q9UPN3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms