Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
RIMBP3Q9UFD9 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC23.43■■□□□ 1.34
RIMBP3Q9UFD9 AC087203.1-201ENST00000532111 1181 ntBASIC23.43■■□□□ 1.34
RIMBP3Q9UFD9 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC23.43■■□□□ 1.34
RIMBP3Q9UFD9 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC23.43■■□□□ 1.34
RIMBP3Q9UFD9 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RIMBP3Q9UFD9 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC23.43■■□□□ 1.34
RIMBP3Q9UFD9 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC23.43■■□□□ 1.34
RIMBP3Q9UFD9 AC005915.1-201ENST00000624912 2018 ntBASIC23.43■■□□□ 1.34
RIMBP3Q9UFD9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC23.43■■□□□ 1.34
RIMBP3Q9UFD9 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RIMBP3Q9UFD9 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RIMBP3Q9UFD9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RIMBP3Q9UFD9 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC23.42■■□□□ 1.34
RIMBP3Q9UFD9 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RIMBP3Q9UFD9 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC23.42■■□□□ 1.34
RIMBP3Q9UFD9 MIR648-201ENST00000385046 94 ntBASIC23.42■■□□□ 1.34
RIMBP3Q9UFD9 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
RIMBP3Q9UFD9 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC23.42■■□□□ 1.34
RIMBP3Q9UFD9 TPST2P1-201ENST00000564073 1102 ntBASIC23.42■■□□□ 1.34
RIMBP3Q9UFD9 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC23.42■■□□□ 1.34
RIMBP3Q9UFD9 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC23.42■■□□□ 1.34
RIMBP3Q9UFD9 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC23.42■■□□□ 1.34
RIMBP3Q9UFD9 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
RIMBP3Q9UFD9 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC23.42■■□□□ 1.34
RIMBP3Q9UFD9 BX322534.1-201ENST00000635574 241 ntBASIC23.42■■□□□ 1.34
RIMBP3Q9UFD9 AC215524.1-201ENST00000635696 241 ntBASIC23.42■■□□□ 1.34
RIMBP3Q9UFD9 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC23.42■■□□□ 1.34
RIMBP3Q9UFD9 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC23.42■■□□□ 1.34
RIMBP3Q9UFD9 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RIMBP3Q9UFD9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC23.42■■□□□ 1.34
RIMBP3Q9UFD9 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RIMBP3Q9UFD9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC23.42■■□□□ 1.34
RIMBP3Q9UFD9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RIMBP3Q9UFD9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 FDPSP7-201ENST00000429043 1054 ntBASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 PEBP1P3-201ENST00000455475 548 ntBASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 ISL1-203ENST00000511384 981 ntTSL 5 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 KRT8P2-201ENST00000556193 944 ntBASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 AC005052.1-201ENST00000625181 2492 ntBASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 AC105020.1-201ENST00000435356 2205 ntBASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 HNRNPABP1-201ENST00000406003 734 ntBASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 NAA40-205ENST00000539656 577 ntTSL 4 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC23.41■■□□□ 1.34
RIMBP3Q9UFD9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC23.4■■□□□ 1.34
RIMBP3Q9UFD9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RIMBP3Q9UFD9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RIMBP3Q9UFD9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
RIMBP3Q9UFD9 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RIMBP3Q9UFD9 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RIMBP3Q9UFD9 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
RIMBP3Q9UFD9 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
RIMBP3Q9UFD9 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RIMBP3Q9UFD9 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC23.4■■□□□ 1.34
RIMBP3Q9UFD9 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RIMBP3Q9UFD9 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RIMBP3Q9UFD9 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RIMBP3Q9UFD9 MIR1226-201ENST00000408658 75 ntBASIC23.4■■□□□ 1.34
RIMBP3Q9UFD9 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC23.4■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms