Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HMG20BQ9P0W2 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 AL158070.2-201ENST00000623713 1621 ntBASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 AC004066.1-201ENST00000502488 802 ntBASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 KRT90P-201ENST00000549264 1064 ntBASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 SAMD11P1-201ENST00000571429 661 ntBASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HMG20BQ9P0W2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 AC104457.1-201ENST00000401024 814 ntBASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 ACTBP8-201ENST00000403258 1108 ntBASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 AC114812.1-204ENST00000449669 728 ntBASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 KRT18P25-201ENST00000508931 1278 ntBASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 AC144831.1-201ENST00000573312 2656 ntBASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HMG20BQ9P0W2 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 CICP11-201ENST00000434745 2827 ntBASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms