Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 MIR346-201ENST00000362234 95 ntBASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 MIR940-201ENST00000401276 94 ntBASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 AC142381.1-201ENST00000426099 345 ntBASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 AC004832.2-201ENST00000426397 482 ntBASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 AC091812.2-201ENST00000619081 385 ntBASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
PCDHB16Q9NRJ7 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 AC232323.1-201ENST00000540724 2099 ntBASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 REXO1L5P-201ENST00000622260 2098 ntBASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.49□□□□□ -0.25
PCDHB16Q9NRJ7 MTDHP5-201ENST00000598980 586 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms