Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
VAT1LQ9HCJ6 C18orf15-201ENST00000623680 2534 ntBASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 AC234783.1-201ENST00000441761 496 ntBASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 AC106760.1-201ENST00000508690 800 ntBASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 SNX29P1-201ENST00000548357 1007 ntBASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 MIR6775-201ENST00000617557 69 ntBASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VAT1LQ9HCJ6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 AL158070.2-201ENST00000623713 1621 ntBASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 MIR658-201ENST00000385210 100 ntBASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 MIR1909-201ENST00000411312 80 ntBASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 KRT43P-201ENST00000434019 910 ntBASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 AP005019.2-201ENST00000615104 511 ntBASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 AC112693.3-201ENST00000624819 1983 ntBASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.8■□□□□ 0.44
VAT1LQ9HCJ6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
VAT1LQ9HCJ6 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms