Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 AZGP1P1-201ENST00000411909 902 ntBASIC18.97■□□□□ 0.63
UPF2Q9HAU5 GHSR-202ENST00000427970 912 ntBASIC18.97■□□□□ 0.63
UPF2Q9HAU5 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 RN7SL510P-201ENST00000581311 263 ntBASIC18.97■□□□□ 0.63
UPF2Q9HAU5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 LINC01230-201ENST00000625222 3017 ntBASIC18.97■□□□□ 0.63
UPF2Q9HAU5 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPF2Q9HAU5 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 KRT18P2-201ENST00000447938 1258 ntBASIC18.96■□□□□ 0.63
UPF2Q9HAU5 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 AC104109.2-201ENST00000602919 1418 ntBASIC18.96■□□□□ 0.63
UPF2Q9HAU5 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 OS9-204ENST00000389146 2091 ntTSL 2 BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPF2Q9HAU5 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 PTENP1-202ENST00000532280 3996 ntBASIC18.95■□□□□ 0.62
UPF2Q9HAU5 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 AC007967.2-201ENST00000432613 625 ntBASIC18.95■□□□□ 0.62
UPF2Q9HAU5 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UPF2Q9HAU5 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms