Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.32■□□□□ 0.36
PTPN18Q99952 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN18Q99952 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN18Q99952 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PTPN18Q99952 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.32■□□□□ 0.36
PTPN18Q99952 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.32■□□□□ 0.36
PTPN18Q99952 AC130709.1-201ENST00000484779 1212 ntBASIC17.32■□□□□ 0.36
PTPN18Q99952 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PTPN18Q99952 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN18Q99952 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.32■□□□□ 0.36
PTPN18Q99952 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN18Q99952 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC17.32■□□□□ 0.36
PTPN18Q99952 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC17.32■□□□□ 0.36
PTPN18Q99952 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN18Q99952 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
PTPN18Q99952 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN18Q99952 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN18Q99952 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PTPN18Q99952 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN18Q99952 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN18Q99952 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN18Q99952 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN18Q99952 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN18Q99952 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
PTPN18Q99952 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN18Q99952 OR6D1P-202ENST00000641007 5290 ntBASIC17.32■□□□□ 0.36
PTPN18Q99952 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN18Q99952 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PTPN18Q99952 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPN18Q99952 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN18Q99952 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN18Q99952 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PTPN18Q99952 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN18Q99952 AL137783.1-201ENST00000623494 1896 ntBASIC17.31■□□□□ 0.36
PTPN18Q99952 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN18Q99952 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN18Q99952 AC112504.1-201ENST00000623415 1841 ntBASIC17.31■□□□□ 0.36
PTPN18Q99952 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.31■□□□□ 0.36
PTPN18Q99952 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
PTPN18Q99952 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN18Q99952 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
PTPN18Q99952 AC012362.1-201ENST00000434906 739 ntBASIC17.31■□□□□ 0.36
PTPN18Q99952 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC17.31■□□□□ 0.36
PTPN18Q99952 AC008723.1-201ENST00000506922 207 ntBASIC17.31■□□□□ 0.36
PTPN18Q99952 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPN18Q99952 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.31■□□□□ 0.36
PTPN18Q99952 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PTPN18Q99952 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC17.31■□□□□ 0.36
PTPN18Q99952 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.31■□□□□ 0.36
PTPN18Q99952 AC005357.2-202ENST00000590507 1060 ntBASIC17.31■□□□□ 0.36
PTPN18Q99952 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.31■□□□□ 0.36
PTPN18Q99952 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN18Q99952 AL157813.1-201ENST00000612996 587 ntBASIC17.31■□□□□ 0.36
PTPN18Q99952 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PTPN18Q99952 AC006058.4-201ENST00000624016 1670 ntBASIC17.31■□□□□ 0.36
PTPN18Q99952 AP003680.1-201ENST00000598970 3660 ntBASIC17.31■□□□□ 0.36
PTPN18Q99952 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PTPN18Q99952 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN18Q99952 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PTPN18Q99952 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN18Q99952 MTHFR-217ENST00000641820 1569 ntBASIC17.31■□□□□ 0.36
PTPN18Q99952 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPN18Q99952 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PTPN18Q99952 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPN18Q99952 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN18Q99952 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PTPN18Q99952 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN18Q99952 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
PTPN18Q99952 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN18Q99952 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN18Q99952 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN18Q99952 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN18Q99952 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PTPN18Q99952 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPN18Q99952 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN18Q99952 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN18Q99952 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PTPN18Q99952 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN18Q99952 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN18Q99952 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN18Q99952 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PTPN18Q99952 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN18Q99952 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN18Q99952 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
PTPN18Q99952 MIR1227-201ENST00000408484 88 ntBASIC17.3■□□□□ 0.36
PTPN18Q99952 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN18Q99952 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN18Q99952 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPN18Q99952 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC17.3■□□□□ 0.36
PTPN18Q99952 AC079112.1-201ENST00000454972 939 ntBASIC17.3■□□□□ 0.36
PTPN18Q99952 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PTPN18Q99952 RBM8B-201ENST00000555532 525 ntBASIC17.3■□□□□ 0.36
PTPN18Q99952 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PTPN18Q99952 AC008825.2-201ENST00000603374 718 ntBASIC17.3■□□□□ 0.36
PTPN18Q99952 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN18Q99952 MIR6769A-201ENST00000617340 73 ntBASIC17.3■□□□□ 0.36
PTPN18Q99952 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN18Q99952 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN18Q99952 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN18Q99952 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms