Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC19.78■□□□□ 0.76
ABCA3Q99758 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
ABCA3Q99758 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ABCA3Q99758 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.78■□□□□ 0.76
ABCA3Q99758 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.78■□□□□ 0.76
ABCA3Q99758 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ABCA3Q99758 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
ABCA3Q99758 LILRP1-201ENST00000444199 1370 ntBASIC19.78■□□□□ 0.76
ABCA3Q99758 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ABCA3Q99758 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ABCA3Q99758 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ABCA3Q99758 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ABCA3Q99758 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ABCA3Q99758 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC19.78■□□□□ 0.76
ABCA3Q99758 DDX39AP1-201ENST00000445147 1181 ntBASIC19.78■□□□□ 0.76
ABCA3Q99758 RPS23-204ENST00000507980 836 ntTSL 2 BASIC19.78■□□□□ 0.76
ABCA3Q99758 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC19.78■□□□□ 0.76
ABCA3Q99758 AC012073.1-201ENST00000606114 1108 ntBASIC19.78■□□□□ 0.76
ABCA3Q99758 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
ABCA3Q99758 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ABCA3Q99758 AC007292.2-201ENST00000593524 1812 ntBASIC19.78■□□□□ 0.76
ABCA3Q99758 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ABCA3Q99758 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
ABCA3Q99758 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.78■□□□□ 0.76
ABCA3Q99758 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ABCA3Q99758 REXO1L2P-201ENST00000425429 2069 ntBASIC19.77■□□□□ 0.76
ABCA3Q99758 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ABCA3Q99758 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
ABCA3Q99758 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ABCA3Q99758 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ABCA3Q99758 NME2-201ENST00000393183 568 ntTSL 2 BASIC19.77■□□□□ 0.76
ABCA3Q99758 HLA-DMA-203ENST00000395305 777 ntBASIC19.77■□□□□ 0.76
ABCA3Q99758 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ABCA3Q99758 AC024293.1-201ENST00000467930 498 ntBASIC19.77■□□□□ 0.76
ABCA3Q99758 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC19.77■□□□□ 0.76
ABCA3Q99758 RNA5SP417-201ENST00000516459 108 ntBASIC19.77■□□□□ 0.76
ABCA3Q99758 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
ABCA3Q99758 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC19.77■□□□□ 0.76
ABCA3Q99758 AP001184.1-201ENST00000637936 376 ntBASIC19.77■□□□□ 0.76
ABCA3Q99758 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ABCA3Q99758 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ABCA3Q99758 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ABCA3Q99758 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ABCA3Q99758 AC012313.1-201ENST00000593393 3059 ntBASIC19.77■□□□□ 0.76
ABCA3Q99758 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC19.77■□□□□ 0.76
ABCA3Q99758 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ABCA3Q99758 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.77■□□□□ 0.76
ABCA3Q99758 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ABCA3Q99758 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.75
ABCA3Q99758 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ABCA3Q99758 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.77■□□□□ 0.75
ABCA3Q99758 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC19.77■□□□□ 0.75
ABCA3Q99758 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ABCA3Q99758 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ABCA3Q99758 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
ABCA3Q99758 ACTBP7-201ENST00000418351 1124 ntBASIC19.76■□□□□ 0.75
ABCA3Q99758 AL592076.1-201ENST00000424448 303 ntBASIC19.76■□□□□ 0.75
ABCA3Q99758 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ABCA3Q99758 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC19.76■□□□□ 0.75
ABCA3Q99758 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC19.76■□□□□ 0.75
ABCA3Q99758 AC012158.2-201ENST00000536546 354 ntBASIC19.76■□□□□ 0.75
ABCA3Q99758 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC19.76■□□□□ 0.75
ABCA3Q99758 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ABCA3Q99758 RN7SL470P-201ENST00000583069 259 ntBASIC19.76■□□□□ 0.75
ABCA3Q99758 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
ABCA3Q99758 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ABCA3Q99758 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ABCA3Q99758 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ABCA3Q99758 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC19.76■□□□□ 0.75
ABCA3Q99758 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.76■□□□□ 0.75
ABCA3Q99758 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ABCA3Q99758 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ABCA3Q99758 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
ABCA3Q99758 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ABCA3Q99758 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ABCA3Q99758 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ABCA3Q99758 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC19.76■□□□□ 0.75
ABCA3Q99758 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC19.76■□□□□ 0.75
ABCA3Q99758 KRT17P4-201ENST00000429445 819 ntBASIC19.76■□□□□ 0.75
ABCA3Q99758 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC19.76■□□□□ 0.75
ABCA3Q99758 RN7SL277P-201ENST00000481521 288 ntBASIC19.76■□□□□ 0.75
ABCA3Q99758 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC19.76■□□□□ 0.75
ABCA3Q99758 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC19.76■□□□□ 0.75
ABCA3Q99758 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ABCA3Q99758 AC105250.1-201ENST00000509378 2057 ntBASIC19.76■□□□□ 0.75
ABCA3Q99758 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC19.75■□□□□ 0.75
ABCA3Q99758 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ABCA3Q99758 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC19.75■□□□□ 0.75
ABCA3Q99758 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ABCA3Q99758 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ABCA3Q99758 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ABCA3Q99758 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ABCA3Q99758 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
ABCA3Q99758 MIR645-201ENST00000385283 94 ntBASIC19.75■□□□□ 0.75
ABCA3Q99758 ERP29P1-201ENST00000442902 706 ntBASIC19.75■□□□□ 0.75
ABCA3Q99758 AC244197.1-201ENST00000456494 951 ntBASIC19.75■□□□□ 0.75
ABCA3Q99758 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
ABCA3Q99758 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC19.75■□□□□ 0.75
ABCA3Q99758 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC19.75■□□□□ 0.75
ABCA3Q99758 THY1-209ENST00000580275 578 ntTSL 3 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms