Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.52■□□□□ 0.08
NDNQ99608 LINC01115-203ENST00000606068 577 ntBASIC15.52■□□□□ 0.08
NDNQ99608 AC023511.2-201ENST00000618803 211 ntBASIC15.52■□□□□ 0.08
NDNQ99608 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
NDNQ99608 AF228730.6-201ENST00000641497 218 ntBASIC15.52■□□□□ 0.08
NDNQ99608 AC084121.3-201ENST00000641716 218 ntBASIC15.52■□□□□ 0.08
NDNQ99608 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.52■□□□□ 0.08
NDNQ99608 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NDNQ99608 Z97205.2-201ENST00000564697 1639 ntBASIC15.52■□□□□ 0.08
NDNQ99608 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NDNQ99608 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
NDNQ99608 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.52■□□□□ 0.07
NDNQ99608 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NDNQ99608 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
NDNQ99608 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
NDNQ99608 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
NDNQ99608 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.52■□□□□ 0.07
NDNQ99608 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.52■□□□□ 0.07
NDNQ99608 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.52■□□□□ 0.07
NDNQ99608 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.52■□□□□ 0.07
NDNQ99608 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NDNQ99608 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.52■□□□□ 0.07
NDNQ99608 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NDNQ99608 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NDNQ99608 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
NDNQ99608 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.51■□□□□ 0.07
NDNQ99608 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.51■□□□□ 0.07
NDNQ99608 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.51■□□□□ 0.07
NDNQ99608 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.51■□□□□ 0.07
NDNQ99608 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
NDNQ99608 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.51■□□□□ 0.07
NDNQ99608 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NDNQ99608 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NDNQ99608 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NDNQ99608 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.51■□□□□ 0.07
NDNQ99608 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NDNQ99608 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.51■□□□□ 0.07
NDNQ99608 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.51■□□□□ 0.07
NDNQ99608 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.51■□□□□ 0.07
NDNQ99608 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.51■□□□□ 0.07
NDNQ99608 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.51■□□□□ 0.07
NDNQ99608 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 AC093028.1-201ENST00000622998 982 ntBASIC15.51■□□□□ 0.07
NDNQ99608 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.51■□□□□ 0.07
NDNQ99608 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.51■□□□□ 0.07
NDNQ99608 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NDNQ99608 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.51■□□□□ 0.07
NDNQ99608 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.51■□□□□ 0.07
NDNQ99608 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.51■□□□□ 0.07
NDNQ99608 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.51■□□□□ 0.07
NDNQ99608 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NDNQ99608 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.51■□□□□ 0.07
NDNQ99608 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDNQ99608 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDNQ99608 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDNQ99608 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDNQ99608 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDNQ99608 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDNQ99608 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDNQ99608 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDNQ99608 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.5■□□□□ 0.07
NDNQ99608 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDNQ99608 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDNQ99608 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
NDNQ99608 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
NDNQ99608 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDNQ99608 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDNQ99608 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NDNQ99608 PCDHA3-202ENST00000532566 4594 ntBASIC15.5■□□□□ 0.07
NDNQ99608 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.5■□□□□ 0.07
NDNQ99608 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.5■□□□□ 0.07
NDNQ99608 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NDNQ99608 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NDNQ99608 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms