Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 KLF2P1-201ENST00000447438 1042 ntBASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 RCC2P8-201ENST00000502779 1035 ntBASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 MIR3147-201ENST00000577811 66 ntBASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 NAP1L6-202ENST00000641404 1222 ntBASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 AMT-239ENST00000636865 1914 ntTSL 5 BASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 AC010491.1-201ENST00000563101 2797 ntBASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CRAMP1Q96RY5 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 LY6E-208ENST00000520531 490 ntTSL 2 BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 RTN3P1-201ENST00000536295 711 ntBASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 AC012044.1-201ENST00000603431 297 ntBASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 AC244394.1-201ENST00000435000 1665 ntBASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 REXO1L4P-201ENST00000605109 1937 ntBASIC18.52■□□□□ 0.56
CRAMP1Q96RY5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CRAMP1Q96RY5 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CRAMP1Q96RY5 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.52■□□□□ 0.55
CRAMP1Q96RY5 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
CRAMP1Q96RY5 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.52■□□□□ 0.55
CRAMP1Q96RY5 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.52■□□□□ 0.55
CRAMP1Q96RY5 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CRAMP1Q96RY5 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CRAMP1Q96RY5 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CRAMP1Q96RY5 AL008718.2-201ENST00000609206 1313 ntBASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 AP003680.1-201ENST00000598970 3660 ntBASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 AC026316.1-201ENST00000398900 414 ntBASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 AC019193.1-201ENST00000506678 823 ntBASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 IQSEC3P1-201ENST00000538799 536 ntBASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 MIR4754-201ENST00000582477 89 ntBASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 CDK7-214ENST00000626796 358 ntTSL 5 BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 FAM90A7P-201ENST00000382628 1395 ntBASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 FAM90A23P-201ENST00000400136 1395 ntBASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CRAMP1Q96RY5 AC105250.1-201ENST00000509378 2057 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms