Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 MEP1AP4-201ENST00000423244 1087 ntBASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 SAMD11P1-201ENST00000571429 661 ntBASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 AC004790.1-201ENST00000612686 536 ntBASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 MYO15B-237ENST00000642007 4893 ntBASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.38□□□□□ -0.11
MS4A4EQ96PG1 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 AC099063.4-201ENST00000641099 1602 ntBASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 FAM86LP-201ENST00000478302 853 ntBASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 AL161772.1-201ENST00000610494 4412 ntBASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 REXO1L2P-201ENST00000425429 2069 ntBASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MS4A4EQ96PG1 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms