Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRRC3BQ96PB8 AC011840.2-201ENST00000563063 1520 ntBASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 AL365203.3-201ENST00000609742 2057 ntBASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 ACTG1P2-201ENST00000415776 1125 ntBASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 ACTG1P11-201ENST00000425411 1125 ntBASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 RN7SL574P-201ENST00000581512 297 ntBASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 RN7SL190P-201ENST00000582519 257 ntBASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 AC009955.4-201ENST00000597192 544 ntBASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 AL136301.1-201ENST00000615830 422 ntBASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 AL023803.2-201ENST00000620080 638 ntBASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 AC091812.3-201ENST00000621362 345 ntBASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 AC004923.1-202ENST00000642106 209 ntBASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 AC004899.1-201ENST00000424687 1714 ntBASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC3BQ96PB8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 AC008132.1-202ENST00000342005 1389 ntBASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 RN7SKP230-201ENST00000365642 335 ntBASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 MIR769-201ENST00000390225 118 ntBASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 AC005324.6-201ENST00000587972 613 ntBASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 AC138696.2-201ENST00000607376 223 ntBASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 AF254983.2-201ENST00000612331 135 ntBASIC15.52■□□□□ 0.08
LRRC3BQ96PB8 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
LRRC3BQ96PB8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC3BQ96PB8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC3BQ96PB8 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC3BQ96PB8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms