Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RPGRQ92834 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPGRQ92834 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPGRQ92834 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RPGRQ92834 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPGRQ92834 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.77■□□□□ 0.6
RPGRQ92834 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RPGRQ92834 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPGRQ92834 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
RPGRQ92834 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RPGRQ92834 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC18.77■□□□□ 0.6
RPGRQ92834 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RPGRQ92834 RPS2P36-201ENST00000456516 831 ntBASIC18.77■□□□□ 0.6
RPGRQ92834 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RPGRQ92834 AC026434.2-201ENST00000506094 1078 ntBASIC18.77■□□□□ 0.6
RPGRQ92834 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC18.77■□□□□ 0.6
RPGRQ92834 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC18.77■□□□□ 0.6
RPGRQ92834 RN7SL574P-201ENST00000581512 297 ntBASIC18.77■□□□□ 0.6
RPGRQ92834 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPGRQ92834 AL353726.2-201ENST00000623259 884 ntBASIC18.77■□□□□ 0.6
RPGRQ92834 AC128714.1-201ENST00000637035 887 ntBASIC18.77■□□□□ 0.6
RPGRQ92834 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPGRQ92834 AL805961.1-203ENST00000641078 1258 ntBASIC18.77■□□□□ 0.6
RPGRQ92834 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPGRQ92834 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC18.77■□□□□ 0.6
RPGRQ92834 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPGRQ92834 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPGRQ92834 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.77■□□□□ 0.6
RPGRQ92834 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
RPGRQ92834 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
RPGRQ92834 AC004899.1-201ENST00000424687 1714 ntBASIC18.77■□□□□ 0.59
RPGRQ92834 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
RPGRQ92834 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RPGRQ92834 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPGRQ92834 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPGRQ92834 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPGRQ92834 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPGRQ92834 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RPGRQ92834 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RPGRQ92834 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RPGRQ92834 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RPGRQ92834 AP000593.2-201ENST00000542775 1433 ntBASIC18.76■□□□□ 0.59
RPGRQ92834 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.76■□□□□ 0.59
RPGRQ92834 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RPGRQ92834 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.76■□□□□ 0.59
RPGRQ92834 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RPGRQ92834 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPGRQ92834 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPGRQ92834 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC18.76■□□□□ 0.59
RPGRQ92834 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RPGRQ92834 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPGRQ92834 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC18.76■□□□□ 0.59
RPGRQ92834 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC18.76■□□□□ 0.59
RPGRQ92834 AC104073.2-201ENST00000453737 312 ntBASIC18.76■□□□□ 0.59
RPGRQ92834 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC18.76■□□□□ 0.59
RPGRQ92834 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC18.76■□□□□ 0.59
RPGRQ92834 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC18.76■□□□□ 0.59
RPGRQ92834 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RPGRQ92834 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.76■□□□□ 0.59
RPGRQ92834 AC079336.7-201ENST00000623428 1078 ntBASIC18.76■□□□□ 0.59
RPGRQ92834 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC18.76■□□□□ 0.59
RPGRQ92834 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
RPGRQ92834 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPGRQ92834 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RPGRQ92834 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPGRQ92834 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPGRQ92834 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.76■□□□□ 0.59
RPGRQ92834 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPGRQ92834 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPGRQ92834 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPGRQ92834 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPGRQ92834 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.75■□□□□ 0.59
RPGRQ92834 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPGRQ92834 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RPGRQ92834 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
RPGRQ92834 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPGRQ92834 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPGRQ92834 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPGRQ92834 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPGRQ92834 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.75■□□□□ 0.59
RPGRQ92834 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RPGRQ92834 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPGRQ92834 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.75■□□□□ 0.59
RPGRQ92834 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RPGRQ92834 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC18.75■□□□□ 0.59
RPGRQ92834 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RPGRQ92834 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC18.75■□□□□ 0.59
RPGRQ92834 NPPA-201ENST00000376476 728 ntTSL 3 BASIC18.75■□□□□ 0.59
RPGRQ92834 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC18.75■□□□□ 0.59
RPGRQ92834 AC104457.1-201ENST00000401024 814 ntBASIC18.75■□□□□ 0.59
RPGRQ92834 SLC16A6P1-201ENST00000413214 1059 ntBASIC18.75■□□□□ 0.59
RPGRQ92834 AC007274.2-201ENST00000421675 662 ntBASIC18.75■□□□□ 0.59
RPGRQ92834 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC18.75■□□□□ 0.59
RPGRQ92834 FTLP1-201ENST00000449155 526 ntBASIC18.75■□□□□ 0.59
RPGRQ92834 AC012618.1-201ENST00000461223 412 ntBASIC18.75■□□□□ 0.59
RPGRQ92834 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC18.75■□□□□ 0.59
RPGRQ92834 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC18.75■□□□□ 0.59
RPGRQ92834 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPGRQ92834 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC18.75■□□□□ 0.59
RPGRQ92834 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms