Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC26.18■■□□□ 1.78
TRIM41Q8WV44 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC26.18■■□□□ 1.78
TRIM41Q8WV44 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC26.18■■□□□ 1.78
TRIM41Q8WV44 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC26.18■■□□□ 1.78
TRIM41Q8WV44 GPR39-203ENST00000622084 900 ntTSL 5 BASIC26.18■■□□□ 1.78
TRIM41Q8WV44 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
TRIM41Q8WV44 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM41Q8WV44 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM41Q8WV44 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM41Q8WV44 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM41Q8WV44 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM41Q8WV44 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM41Q8WV44 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM41Q8WV44 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM41Q8WV44 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC26.17■■□□□ 1.78
TRIM41Q8WV44 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM41Q8WV44 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC26.17■■□□□ 1.78
TRIM41Q8WV44 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM41Q8WV44 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC26.17■■□□□ 1.78
TRIM41Q8WV44 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM41Q8WV44 AC007274.2-201ENST00000421675 662 ntBASIC26.17■■□□□ 1.78
TRIM41Q8WV44 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM41Q8WV44 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC26.17■■□□□ 1.78
TRIM41Q8WV44 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM41Q8WV44 NUP210P1-202ENST00000504322 710 ntBASIC26.17■■□□□ 1.78
TRIM41Q8WV44 IFT20-206ENST00000578122 834 ntTSL 2 BASIC26.17■■□□□ 1.78
TRIM41Q8WV44 IFT20-208ENST00000578985 831 ntTSL 3 BASIC26.17■■□□□ 1.78
TRIM41Q8WV44 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC26.17■■□□□ 1.78
TRIM41Q8WV44 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM41Q8WV44 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM41Q8WV44 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM41Q8WV44 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM41Q8WV44 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC26.17■■□□□ 1.78
TRIM41Q8WV44 AC134312.5-201ENST00000568031 1313 ntBASIC26.16■■□□□ 1.78
TRIM41Q8WV44 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM41Q8WV44 AL138799.1-201ENST00000448213 1675 ntBASIC26.16■■□□□ 1.78
TRIM41Q8WV44 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM41Q8WV44 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM41Q8WV44 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM41Q8WV44 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
TRIM41Q8WV44 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM41Q8WV44 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM41Q8WV44 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC26.16■■□□□ 1.78
TRIM41Q8WV44 BRI3P1-201ENST00000440440 378 ntBASIC26.16■■□□□ 1.78
TRIM41Q8WV44 APOA2-204ENST00000464492 530 ntTSL 3 BASIC26.16■■□□□ 1.78
TRIM41Q8WV44 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC26.16■■□□□ 1.78
TRIM41Q8WV44 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC26.16■■□□□ 1.78
TRIM41Q8WV44 AHRR-211ENST00000515206 462 ntTSL 5 BASIC26.16■■□□□ 1.78
TRIM41Q8WV44 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
TRIM41Q8WV44 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC26.16■■□□□ 1.78
TRIM41Q8WV44 AP001063.1-201ENST00000568332 529 ntBASIC26.16■■□□□ 1.78
TRIM41Q8WV44 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
TRIM41Q8WV44 METTL26-214ENST00000614890 801 ntTSL 3 BASIC26.16■■□□□ 1.78
TRIM41Q8WV44 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM41Q8WV44 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM41Q8WV44 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM41Q8WV44 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM41Q8WV44 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TRIM41Q8WV44 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TRIM41Q8WV44 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC26.15■■□□□ 1.78
TRIM41Q8WV44 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC26.15■■□□□ 1.78
TRIM41Q8WV44 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TRIM41Q8WV44 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
TRIM41Q8WV44 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TRIM41Q8WV44 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC26.15■■□□□ 1.78
TRIM41Q8WV44 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC26.15■■□□□ 1.78
TRIM41Q8WV44 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC26.15■■□□□ 1.78
TRIM41Q8WV44 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC26.15■■□□□ 1.78
TRIM41Q8WV44 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
TRIM41Q8WV44 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC26.15■■□□□ 1.78
TRIM41Q8WV44 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
TRIM41Q8WV44 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TRIM41Q8WV44 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC26.15■■□□□ 1.78
TRIM41Q8WV44 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TRIM41Q8WV44 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TRIM41Q8WV44 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TRIM41Q8WV44 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC26.15■■□□□ 1.78
TRIM41Q8WV44 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TRIM41Q8WV44 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TRIM41Q8WV44 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM41Q8WV44 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM41Q8WV44 AC090616.6-203ENST00000579186 1945 ntBASIC26.14■■□□□ 1.78
TRIM41Q8WV44 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC26.14■■□□□ 1.78
TRIM41Q8WV44 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM41Q8WV44 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC26.14■■□□□ 1.78
TRIM41Q8WV44 HOMER2P2-201ENST00000451621 847 ntBASIC26.14■■□□□ 1.78
TRIM41Q8WV44 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM41Q8WV44 PFN2-205ENST00000461868 613 ntTSL 2 BASIC26.14■■□□□ 1.78
TRIM41Q8WV44 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM41Q8WV44 AP001582.1-201ENST00000525856 295 ntBASIC26.14■■□□□ 1.78
TRIM41Q8WV44 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC26.14■■□□□ 1.78
TRIM41Q8WV44 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC26.14■■□□□ 1.78
TRIM41Q8WV44 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
TRIM41Q8WV44 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC26.14■■□□□ 1.78
TRIM41Q8WV44 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC26.14■■□□□ 1.78
TRIM41Q8WV44 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC26.14■■□□□ 1.78
TRIM41Q8WV44 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM41Q8WV44 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
TRIM41Q8WV44 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
TRIM41Q8WV44 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC26.14■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms