Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC18.37■□□□□ 0.53
SNED1Q8TER0 CTBP2P4-201ENST00000513884 920 ntBASIC18.37■□□□□ 0.53
SNED1Q8TER0 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SNED1Q8TER0 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC18.37■□□□□ 0.53
SNED1Q8TER0 MIR3677-201ENST00000578964 60 ntBASIC18.37■□□□□ 0.53
SNED1Q8TER0 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC18.37■□□□□ 0.53
SNED1Q8TER0 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SNED1Q8TER0 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SNED1Q8TER0 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC18.37■□□□□ 0.53
SNED1Q8TER0 AL157813.1-201ENST00000612996 587 ntBASIC18.37■□□□□ 0.53
SNED1Q8TER0 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC18.37■□□□□ 0.53
SNED1Q8TER0 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNED1Q8TER0 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SNED1Q8TER0 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNED1Q8TER0 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC18.37■□□□□ 0.53
SNED1Q8TER0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNED1Q8TER0 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.37■□□□□ 0.53
SNED1Q8TER0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNED1Q8TER0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.37■□□□□ 0.53
SNED1Q8TER0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNED1Q8TER0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SNED1Q8TER0 REXO1L4P-201ENST00000605109 1937 ntBASIC18.37■□□□□ 0.53
SNED1Q8TER0 AMT-239ENST00000636865 1914 ntTSL 5 BASIC18.37■□□□□ 0.53
SNED1Q8TER0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNED1Q8TER0 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNED1Q8TER0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.36■□□□□ 0.53
SNED1Q8TER0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNED1Q8TER0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.36■□□□□ 0.53
SNED1Q8TER0 AC020910.5-201ENST00000623668 1865 ntBASIC18.36■□□□□ 0.53
SNED1Q8TER0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNED1Q8TER0 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SNED1Q8TER0 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SNED1Q8TER0 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNED1Q8TER0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNED1Q8TER0 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNED1Q8TER0 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC18.36■□□□□ 0.53
SNED1Q8TER0 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNED1Q8TER0 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC18.36■□□□□ 0.53
SNED1Q8TER0 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC18.36■□□□□ 0.53
SNED1Q8TER0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.36■□□□□ 0.53
SNED1Q8TER0 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC18.36■□□□□ 0.53
SNED1Q8TER0 PGAM1P5-201ENST00000548011 764 ntBASIC18.36■□□□□ 0.53
SNED1Q8TER0 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC18.36■□□□□ 0.53
SNED1Q8TER0 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SNED1Q8TER0 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC18.36■□□□□ 0.53
SNED1Q8TER0 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC18.36■□□□□ 0.53
SNED1Q8TER0 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SNED1Q8TER0 AC242376.2-201ENST00000619355 883 ntBASIC18.36■□□□□ 0.53
SNED1Q8TER0 RPL35-206ENST00000629845 340 ntTSL 5 BASIC18.36■□□□□ 0.53
SNED1Q8TER0 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNED1Q8TER0 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNED1Q8TER0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNED1Q8TER0 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNED1Q8TER0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNED1Q8TER0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNED1Q8TER0 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNED1Q8TER0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNED1Q8TER0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNED1Q8TER0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SNED1Q8TER0 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNED1Q8TER0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.35■□□□□ 0.53
SNED1Q8TER0 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNED1Q8TER0 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNED1Q8TER0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNED1Q8TER0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.35■□□□□ 0.53
SNED1Q8TER0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNED1Q8TER0 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.35■□□□□ 0.53
SNED1Q8TER0 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
SNED1Q8TER0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.35■□□□□ 0.53
SNED1Q8TER0 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC18.35■□□□□ 0.53
SNED1Q8TER0 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SNED1Q8TER0 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNED1Q8TER0 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNED1Q8TER0 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SNED1Q8TER0 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC18.35■□□□□ 0.53
SNED1Q8TER0 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC18.35■□□□□ 0.53
SNED1Q8TER0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNED1Q8TER0 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC18.35■□□□□ 0.53
SNED1Q8TER0 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC18.35■□□□□ 0.53
SNED1Q8TER0 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC18.35■□□□□ 0.53
SNED1Q8TER0 NAT9-211ENST00000580632 799 ntTSL 3 BASIC18.35■□□□□ 0.53
SNED1Q8TER0 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC18.35■□□□□ 0.53
SNED1Q8TER0 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC18.35■□□□□ 0.53
SNED1Q8TER0 NAP1L6-202ENST00000641404 1222 ntBASIC18.35■□□□□ 0.53
SNED1Q8TER0 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC18.35■□□□□ 0.53
SNED1Q8TER0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNED1Q8TER0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SNED1Q8TER0 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNED1Q8TER0 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC18.35■□□□□ 0.53
SNED1Q8TER0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNED1Q8TER0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNED1Q8TER0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNED1Q8TER0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNED1Q8TER0 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC18.35■□□□□ 0.53
SNED1Q8TER0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNED1Q8TER0 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNED1Q8TER0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNED1Q8TER0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNED1Q8TER0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNED1Q8TER0 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms