Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
BEST2Q8NFU1 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
BEST2Q8NFU1 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
BEST2Q8NFU1 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
BEST2Q8NFU1 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 NORAD-201ENST00000565493 5339 ntBASIC16.51■□□□□ 0.23
BEST2Q8NFU1 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 PDIA3P1-201ENST00000471856 1510 ntBASIC16.51■□□□□ 0.23
BEST2Q8NFU1 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 LRRC59-203ENST00000576448 1531 ntBASIC16.51■□□□□ 0.23
BEST2Q8NFU1 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 KLF2P4-201ENST00000451959 1225 ntBASIC16.51■□□□□ 0.23
BEST2Q8NFU1 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 AC104989.1-201ENST00000519711 778 ntBASIC16.51■□□□□ 0.23
BEST2Q8NFU1 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 AC145423.3-201ENST00000615987 467 ntBASIC16.51■□□□□ 0.23
BEST2Q8NFU1 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BEST2Q8NFU1 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 AC063926.3-201ENST00000624734 5658 ntBASIC16.5■□□□□ 0.23
BEST2Q8NFU1 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 HLA-V-201ENST00000429037 534 ntBASIC16.5■□□□□ 0.23
BEST2Q8NFU1 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 KRT223P-202ENST00000449164 1292 ntBASIC16.5■□□□□ 0.23
BEST2Q8NFU1 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 AC148477.4-201ENST00000613430 1793 ntBASIC16.5■□□□□ 0.23
BEST2Q8NFU1 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 KRT8P14-201ENST00000414254 1442 ntBASIC16.5■□□□□ 0.23
BEST2Q8NFU1 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 C18orf15-201ENST00000623680 2534 ntBASIC16.5■□□□□ 0.23
BEST2Q8NFU1 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
BEST2Q8NFU1 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
BEST2Q8NFU1 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
BEST2Q8NFU1 AC112693.3-201ENST00000624819 1983 ntBASIC16.49■□□□□ 0.23
BEST2Q8NFU1 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.49■□□□□ 0.23
BEST2Q8NFU1 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.49■□□□□ 0.23
BEST2Q8NFU1 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BEST2Q8NFU1 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms