Protein–RNA interactions for Protein: Q7L576

CYFIP1, Cytoplasmic FMR1-interacting protein 1, humanhuman

Predictions only

Length 1,253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1Q7L576 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 RPL5P21-201ENST00000404620 815 ntBASIC17.22■□□□□ 0.35
CYFIP1Q7L576 MIR1202-201ENST00000408529 83 ntBASIC17.22■□□□□ 0.35
CYFIP1Q7L576 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 RPL13AP20-201ENST00000459725 609 ntBASIC17.22■□□□□ 0.35
CYFIP1Q7L576 AC022494.1-201ENST00000466044 728 ntBASIC17.22■□□□□ 0.35
CYFIP1Q7L576 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 DUX4L45-201ENST00000566406 1057 ntBASIC17.22■□□□□ 0.35
CYFIP1Q7L576 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 ECM1P1-201ENST00000604092 1279 ntBASIC17.22■□□□□ 0.35
CYFIP1Q7L576 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYFIP1Q7L576 AHCYP2-201ENST00000430630 1300 ntBASIC17.21■□□□□ 0.35
CYFIP1Q7L576 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 MIR4525-201ENST00000580000 75 ntBASIC17.21■□□□□ 0.35
CYFIP1Q7L576 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYFIP1Q7L576 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CYFIP1Q7L576 KRT8P14-201ENST00000414254 1442 ntBASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms