Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 NDUFV2P1-201ENST00000596415 907 ntBASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.44■□□□□ 0.22
CTC1Q2NKJ3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 IMP3P2-201ENST00000489760 475 ntBASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 AC126915.1-201ENST00000522847 1038 ntBASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 AL450472.2-201ENST00000603663 1156 ntBASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 AL451050.2-201ENST00000606967 682 ntBASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 AC097724.1-201ENST00000609581 426 ntBASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTC1Q2NKJ3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 LDHBP1-201ENST00000455730 1119 ntBASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 AL590640.2-201ENST00000457038 527 ntBASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 AC128714.1-201ENST00000637035 887 ntBASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CTC1Q2NKJ3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms