Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO4Q2I0M5 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RSPO4Q2I0M5 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RSPO4Q2I0M5 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 AL139094.1-201ENST00000405549 1188 ntBASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 RN7SL258P-201ENST00000478664 300 ntBASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 AC130709.1-201ENST00000484779 1212 ntBASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 AC008723.1-201ENST00000506922 207 ntBASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 AC026803.1-201ENST00000569130 274 ntBASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 AC005632.3-201ENST00000605544 308 ntBASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 AC092299.1-201ENST00000632679 757 ntBASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 AC008894.3-201ENST00000624324 3103 ntBASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 AL603756.1-201ENST00000606511 2163 ntBASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.77□□□□□ -0.05
RSPO4Q2I0M5 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 NHP2-202ENST00000314397 599 ntTSL 2 BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 AL357373.1-201ENST00000394974 322 ntBASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 ACTBP7-201ENST00000418351 1124 ntBASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 RPL18AP3-201ENST00000462885 528 ntBASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 MIR5196-201ENST00000578146 115 ntBASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 AC105137.3-201ENST00000617588 984 ntBASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 AC244250.3-201ENST00000620749 366 ntBASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RSPO4Q2I0M5 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 LINC02199-201ENST00000506655 2702 ntBASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 AC092364.2-201ENST00000596710 2692 ntBASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RSPO4Q2I0M5 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms