Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCS1Q01581 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
HMGCS1Q01581 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.89□□□□□ -0.03
HMGCS1Q01581 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCS1Q01581 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HMGCS1Q01581 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCS1Q01581 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCS1Q01581 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGCS1Q01581 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCS1Q01581 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.88□□□□□ -0.03
HMGCS1Q01581 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCS1Q01581 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HMGCS1Q01581 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCS1Q01581 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HMGCS1Q01581 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.88□□□□□ -0.03
HMGCS1Q01581 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCS1Q01581 OR2I1P-210ENST00000642037 4691 ntBASIC14.88□□□□□ -0.03
HMGCS1Q01581 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCS1Q01581 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
HMGCS1Q01581 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCS1Q01581 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCS1Q01581 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HMGCS1Q01581 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCS1Q01581 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCS1Q01581 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCS1Q01581 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCS1Q01581 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCS1Q01581 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCS1Q01581 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCS1Q01581 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.88□□□□□ -0.03
HMGCS1Q01581 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HMGCS1Q01581 PMS2P2-201ENST00000425039 1128 ntBASIC14.88□□□□□ -0.03
HMGCS1Q01581 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.88□□□□□ -0.03
HMGCS1Q01581 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.88□□□□□ -0.03
HMGCS1Q01581 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.88□□□□□ -0.03
HMGCS1Q01581 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCS1Q01581 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HMGCS1Q01581 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.88□□□□□ -0.03
HMGCS1Q01581 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.88□□□□□ -0.03
HMGCS1Q01581 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.88□□□□□ -0.03
HMGCS1Q01581 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.88□□□□□ -0.03
HMGCS1Q01581 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCS1Q01581 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCS1Q01581 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HMGCS1Q01581 CICP14-201ENST00000629111 2732 ntBASIC14.88□□□□□ -0.03
HMGCS1Q01581 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCS1Q01581 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCS1Q01581 AL390755.1-201ENST00000623716 2027 ntBASIC14.88□□□□□ -0.03
HMGCS1Q01581 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGCS1Q01581 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.88□□□□□ -0.03
HMGCS1Q01581 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.88□□□□□ -0.03
HMGCS1Q01581 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.88□□□□□ -0.03
HMGCS1Q01581 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.88□□□□□ -0.03
HMGCS1Q01581 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
HMGCS1Q01581 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCS1Q01581 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCS1Q01581 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCS1Q01581 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 AC007292.2-201ENST00000593524 1812 ntBASIC14.87□□□□□ -0.03
HMGCS1Q01581 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCS1Q01581 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCS1Q01581 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCS1Q01581 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCS1Q01581 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCS1Q01581 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCS1Q01581 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCS1Q01581 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCS1Q01581 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 AC107890.1-201ENST00000422478 521 ntBASIC14.87□□□□□ -0.03
HMGCS1Q01581 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 KRT18P43-201ENST00000469825 1281 ntBASIC14.87□□□□□ -0.03
HMGCS1Q01581 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 AC044860.1-202ENST00000559481 777 ntBASIC14.87□□□□□ -0.03
HMGCS1Q01581 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 AC015911.4-201ENST00000588022 1070 ntBASIC14.87□□□□□ -0.03
HMGCS1Q01581 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCS1Q01581 AC232323.1-201ENST00000540724 2099 ntBASIC14.87□□□□□ -0.03
HMGCS1Q01581 REXO1L5P-201ENST00000622260 2098 ntBASIC14.87□□□□□ -0.03
HMGCS1Q01581 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.87□□□□□ -0.03
HMGCS1Q01581 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCS1Q01581 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGCS1Q01581 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms