Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX6-1P78426 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.67□□□□□ -0.22
NKX6-1P78426 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.67□□□□□ -0.22
NKX6-1P78426 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX6-1P78426 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NKX6-1P78426 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.67□□□□□ -0.22
NKX6-1P78426 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.67□□□□□ -0.22
NKX6-1P78426 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.67□□□□□ -0.22
NKX6-1P78426 MIR8072-201ENST00000614241 80 ntBASIC13.67□□□□□ -0.22
NKX6-1P78426 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.67□□□□□ -0.22
NKX6-1P78426 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NKX6-1P78426 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
NKX6-1P78426 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NKX6-1P78426 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.67□□□□□ -0.22
NKX6-1P78426 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 C8orf49-201ENST00000525043 1968 ntBASIC13.67□□□□□ -0.22
NKX6-1P78426 CDC14C-201ENST00000428251 1719 ntBASIC13.67□□□□□ -0.22
NKX6-1P78426 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 CLK3P2-201ENST00000427566 1453 ntBASIC13.67□□□□□ -0.22
NKX6-1P78426 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NKX6-1P78426 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.67□□□□□ -0.22
NKX6-1P78426 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX6-1P78426 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-1P78426 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-1P78426 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.66□□□□□ -0.22
NKX6-1P78426 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-1P78426 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-1P78426 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-1P78426 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
NKX6-1P78426 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-1P78426 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NKX6-1P78426 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.66□□□□□ -0.22
NKX6-1P78426 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-1P78426 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
NKX6-1P78426 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NKX6-1P78426 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-1P78426 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-1P78426 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-1P78426 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-1P78426 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-1P78426 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NKX6-1P78426 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-1P78426 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX6-1P78426 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-1P78426 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
NKX6-1P78426 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX6-1P78426 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.66□□□□□ -0.22
NKX6-1P78426 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-1P78426 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.66□□□□□ -0.22
NKX6-1P78426 RPL13P2-201ENST00000440687 659 ntBASIC13.66□□□□□ -0.22
NKX6-1P78426 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.66□□□□□ -0.22
NKX6-1P78426 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX6-1P78426 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.66□□□□□ -0.22
NKX6-1P78426 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX6-1P78426 BTNL10-201ENST00000595971 695 ntBASIC13.66□□□□□ -0.22
NKX6-1P78426 AC097359.3-201ENST00000603982 1210 ntBASIC13.66□□□□□ -0.22
NKX6-1P78426 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
NKX6-1P78426 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.66□□□□□ -0.22
NKX6-1P78426 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-1P78426 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-1P78426 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-1P78426 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-1P78426 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NKX6-1P78426 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-1P78426 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-1P78426 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-1P78426 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.66□□□□□ -0.22
NKX6-1P78426 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
NKX6-1P78426 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.66□□□□□ -0.22
NKX6-1P78426 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-1P78426 LINC02447-202ENST00000501888 2146 ntBASIC13.66□□□□□ -0.22
NKX6-1P78426 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.66□□□□□ -0.22
NKX6-1P78426 AC126177.1-201ENST00000547829 2218 ntBASIC13.66□□□□□ -0.22
NKX6-1P78426 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NKX6-1P78426 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NKX6-1P78426 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
NKX6-1P78426 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-1P78426 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
NKX6-1P78426 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NKX6-1P78426 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
NKX6-1P78426 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-1P78426 AP002414.2-201ENST00000591780 3365 ntBASIC13.65□□□□□ -0.22
NKX6-1P78426 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-1P78426 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX6-1P78426 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-1P78426 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
NKX6-1P78426 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NKX6-1P78426 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.65□□□□□ -0.22
NKX6-1P78426 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms