Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.76□□□□□ -0.21
SRP9P49458 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
SRP9P49458 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.76□□□□□ -0.21
SRP9P49458 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.76□□□□□ -0.21
SRP9P49458 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.76□□□□□ -0.21
SRP9P49458 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.76□□□□□ -0.21
SRP9P49458 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.76□□□□□ -0.21
SRP9P49458 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 AC067863.1-201ENST00000494933 530 ntBASIC13.76□□□□□ -0.21
SRP9P49458 AC069262.1-201ENST00000539058 672 ntBASIC13.76□□□□□ -0.21
SRP9P49458 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SRP9P49458 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
SRP9P49458 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
SRP9P49458 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.76□□□□□ -0.21
SRP9P49458 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.76□□□□□ -0.21
SRP9P49458 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SRP9P49458 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SRP9P49458 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.76□□□□□ -0.21
SRP9P49458 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
SRP9P49458 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
SRP9P49458 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SRP9P49458 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
SRP9P49458 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.76□□□□□ -0.21
SRP9P49458 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SRP9P49458 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.75□□□□□ -0.21
SRP9P49458 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
SRP9P49458 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.75□□□□□ -0.21
SRP9P49458 AC126365.1-201ENST00000578585 1514 ntBASIC13.75□□□□□ -0.21
SRP9P49458 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SRP9P49458 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
SRP9P49458 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRP9P49458 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRP9P49458 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.75□□□□□ -0.21
SRP9P49458 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.75□□□□□ -0.21
SRP9P49458 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRP9P49458 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SRP9P49458 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRP9P49458 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.75□□□□□ -0.21
SRP9P49458 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRP9P49458 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.75□□□□□ -0.21
SRP9P49458 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SRP9P49458 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRP9P49458 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRP9P49458 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.75□□□□□ -0.21
SRP9P49458 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SRP9P49458 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.75□□□□□ -0.21
SRP9P49458 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SRP9P49458 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.75□□□□□ -0.21
SRP9P49458 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.75□□□□□ -0.21
SRP9P49458 FAM86GP-201ENST00000448322 971 ntBASIC13.75□□□□□ -0.21
SRP9P49458 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SRP9P49458 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.75□□□□□ -0.21
SRP9P49458 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.75□□□□□ -0.21
SRP9P49458 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRP9P49458 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.75□□□□□ -0.21
SRP9P49458 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.75□□□□□ -0.21
SRP9P49458 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRP9P49458 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SRP9P49458 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRP9P49458 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.75□□□□□ -0.21
SRP9P49458 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRP9P49458 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.75□□□□□ -0.21
SRP9P49458 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SRP9P49458 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SRP9P49458 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRP9P49458 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRP9P49458 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.75□□□□□ -0.21
SRP9P49458 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRP9P49458 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRP9P49458 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SRP9P49458 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SRP9P49458 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.75□□□□□ -0.21
SRP9P49458 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
SRP9P49458 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.75□□□□□ -0.21
SRP9P49458 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SRP9P49458 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.75□□□□□ -0.21
SRP9P49458 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SRP9P49458 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms