Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.42□□□□□ -0.1
NR4A1P22736 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.42□□□□□ -0.1
NR4A1P22736 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR4A1P22736 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR4A1P22736 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
NR4A1P22736 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.42□□□□□ -0.1
NR4A1P22736 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR4A1P22736 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
NR4A1P22736 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR4A1P22736 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR4A1P22736 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR4A1P22736 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NR4A1P22736 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR4A1P22736 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
NR4A1P22736 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR4A1P22736 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NR4A1P22736 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR4A1P22736 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
NR4A1P22736 HAUS4P1-201ENST00000406739 1145 ntBASIC14.42□□□□□ -0.1
NR4A1P22736 AC092474.2-201ENST00000424288 719 ntBASIC14.42□□□□□ -0.1
NR4A1P22736 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR4A1P22736 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR4A1P22736 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.42□□□□□ -0.1
NR4A1P22736 AC004967.1-201ENST00000453589 447 ntBASIC14.42□□□□□ -0.1
NR4A1P22736 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR4A1P22736 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.42□□□□□ -0.1
NR4A1P22736 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
NR4A1P22736 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.42□□□□□ -0.1
NR4A1P22736 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
NR4A1P22736 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.42□□□□□ -0.1
NR4A1P22736 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NR4A1P22736 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
NR4A1P22736 AL691403.2-201ENST00000618460 490 ntBASIC14.42□□□□□ -0.1
NR4A1P22736 AC134684.3-201ENST00000641758 218 ntBASIC14.42□□□□□ -0.1
NR4A1P22736 AC079781.4-201ENST00000641908 219 ntBASIC14.42□□□□□ -0.1
NR4A1P22736 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NR4A1P22736 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.42□□□□□ -0.1
NR4A1P22736 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR4A1P22736 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NR4A1P22736 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.42□□□□□ -0.1
NR4A1P22736 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR4A1P22736 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.42□□□□□ -0.1
NR4A1P22736 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.42□□□□□ -0.1
NR4A1P22736 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.42□□□□□ -0.1
NR4A1P22736 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.42□□□□□ -0.1
NR4A1P22736 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR4A1P22736 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR4A1P22736 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.42□□□□□ -0.1
NR4A1P22736 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.42□□□□□ -0.1
NR4A1P22736 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR4A1P22736 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NR4A1P22736 AC023024.2-201ENST00000623561 1993 ntBASIC14.42□□□□□ -0.1
NR4A1P22736 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NR4A1P22736 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A1P22736 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A1P22736 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A1P22736 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A1P22736 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.41□□□□□ -0.1
NR4A1P22736 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
NR4A1P22736 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A1P22736 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A1P22736 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A1P22736 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A1P22736 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
NR4A1P22736 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.41□□□□□ -0.1
NR4A1P22736 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.41□□□□□ -0.1
NR4A1P22736 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A1P22736 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
NR4A1P22736 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
NR4A1P22736 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A1P22736 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A1P22736 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A1P22736 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.41□□□□□ -0.1
NR4A1P22736 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A1P22736 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A1P22736 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A1P22736 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A1P22736 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A1P22736 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
NR4A1P22736 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A1P22736 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A1P22736 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A1P22736 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NR4A1P22736 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.41□□□□□ -0.1
NR4A1P22736 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.41□□□□□ -0.1
NR4A1P22736 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.41□□□□□ -0.1
NR4A1P22736 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.41□□□□□ -0.1
NR4A1P22736 FAM86C2P-203ENST00000528684 1004 ntBASIC14.41□□□□□ -0.1
NR4A1P22736 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.41□□□□□ -0.1
NR4A1P22736 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.41□□□□□ -0.1
NR4A1P22736 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.41□□□□□ -0.1
NR4A1P22736 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.41□□□□□ -0.1
NR4A1P22736 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.41□□□□□ -0.1
NR4A1P22736 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.41□□□□□ -0.1
NR4A1P22736 AC099522.2-201ENST00000607001 744 ntBASIC14.41□□□□□ -0.1
NR4A1P22736 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.41□□□□□ -0.1
NR4A1P22736 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.41□□□□□ -0.1
NR4A1P22736 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.41□□□□□ -0.1
NR4A1P22736 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.41□□□□□ -0.1
NR4A1P22736 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms