Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA3P22001 AC006058.4-201ENST00000624016 1670 ntBASIC18.51■□□□□ 0.55
KCNA3P22001 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA3P22001 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA3P22001 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA3P22001 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA3P22001 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA3P22001 MIR557-201ENST00000385239 98 ntBASIC18.51■□□□□ 0.55
KCNA3P22001 AL627422.1-201ENST00000434104 580 ntBASIC18.51■□□□□ 0.55
KCNA3P22001 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC18.51■□□□□ 0.55
KCNA3P22001 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC18.51■□□□□ 0.55
KCNA3P22001 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC18.51■□□□□ 0.55
KCNA3P22001 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC18.51■□□□□ 0.55
KCNA3P22001 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC18.51■□□□□ 0.55
KCNA3P22001 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
KCNA3P22001 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC18.51■□□□□ 0.55
KCNA3P22001 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
KCNA3P22001 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA3P22001 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC18.51■□□□□ 0.55
KCNA3P22001 AC084781.1-201ENST00000613737 656 ntBASIC18.51■□□□□ 0.55
KCNA3P22001 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA3P22001 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
KCNA3P22001 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.51■□□□□ 0.55
KCNA3P22001 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
KCNA3P22001 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.51■□□□□ 0.55
KCNA3P22001 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.51■□□□□ 0.55
KCNA3P22001 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA3P22001 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.51■□□□□ 0.55
KCNA3P22001 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.51■□□□□ 0.55
KCNA3P22001 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA3P22001 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA3P22001 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.51■□□□□ 0.55
KCNA3P22001 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNA3P22001 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA3P22001 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
KCNA3P22001 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA3P22001 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
KCNA3P22001 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA3P22001 AL360270.3-201ENST00000609118 1348 ntBASIC18.5■□□□□ 0.55
KCNA3P22001 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.5■□□□□ 0.55
KCNA3P22001 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
KCNA3P22001 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
KCNA3P22001 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA3P22001 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.5■□□□□ 0.55
KCNA3P22001 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC18.5■□□□□ 0.55
KCNA3P22001 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.5■□□□□ 0.55
KCNA3P22001 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA3P22001 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA3P22001 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.5■□□□□ 0.55
KCNA3P22001 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC18.5■□□□□ 0.55
KCNA3P22001 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA3P22001 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA3P22001 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC18.5■□□□□ 0.55
KCNA3P22001 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC18.5■□□□□ 0.55
KCNA3P22001 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA3P22001 NSD1-211ENST00000511258 809 ntTSL 3 BASIC18.5■□□□□ 0.55
KCNA3P22001 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA3P22001 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA3P22001 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.5■□□□□ 0.55
KCNA3P22001 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
KCNA3P22001 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA3P22001 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA3P22001 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA3P22001 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA3P22001 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.5■□□□□ 0.55
KCNA3P22001 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA3P22001 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA3P22001 HTR7P1-202ENST00000624664 4411 ntBASIC18.5■□□□□ 0.55
KCNA3P22001 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA3P22001 AGGF1P2-201ENST00000426656 2106 ntBASIC18.5■□□□□ 0.55
KCNA3P22001 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
KCNA3P22001 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA3P22001 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.5■□□□□ 0.55
KCNA3P22001 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA3P22001 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA3P22001 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA3P22001 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
KCNA3P22001 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KCNA3P22001 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA3P22001 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA3P22001 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
KCNA3P22001 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
KCNA3P22001 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA3P22001 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.49■□□□□ 0.55
KCNA3P22001 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
KCNA3P22001 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA3P22001 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA3P22001 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
KCNA3P22001 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
KCNA3P22001 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
KCNA3P22001 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA3P22001 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA3P22001 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
KCNA3P22001 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA3P22001 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA3P22001 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC18.49■□□□□ 0.55
KCNA3P22001 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA3P22001 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA3P22001 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.49■□□□□ 0.55
KCNA3P22001 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms