Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PTPN1P18031 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN1P18031 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN1P18031 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN1P18031 AC144831.1-201ENST00000573312 2656 ntBASIC16.27■□□□□ 0.2
PTPN1P18031 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN1P18031 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PTPN1P18031 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
PTPN1P18031 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN1P18031 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPN1P18031 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN1P18031 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN1P18031 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PTPN1P18031 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN1P18031 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN1P18031 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPN1P18031 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN1P18031 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPN1P18031 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPN1P18031 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.27■□□□□ 0.2
PTPN1P18031 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN1P18031 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PTPN1P18031 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PTPN1P18031 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN1P18031 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PTPN1P18031 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN1P18031 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
PTPN1P18031 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN1P18031 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.27■□□□□ 0.19
PTPN1P18031 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN1P18031 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN1P18031 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PTPN1P18031 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.27■□□□□ 0.19
PTPN1P18031 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN1P18031 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PTPN1P18031 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN1P18031 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.27■□□□□ 0.19
PTPN1P18031 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN1P18031 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN1P18031 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN1P18031 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PTPN1P18031 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.27■□□□□ 0.19
PTPN1P18031 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN1P18031 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN1P18031 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN1P18031 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.26■□□□□ 0.19
PTPN1P18031 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PTPN1P18031 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN1P18031 AC148477.4-201ENST00000613430 1793 ntBASIC16.26■□□□□ 0.19
PTPN1P18031 KRT8P35-201ENST00000483942 1338 ntBASIC16.26■□□□□ 0.19
PTPN1P18031 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.26■□□□□ 0.19
PTPN1P18031 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN1P18031 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN1P18031 TSPY26P-202ENST00000565928 3884 ntBASIC16.26■□□□□ 0.19
PTPN1P18031 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN1P18031 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN1P18031 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN1P18031 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.26■□□□□ 0.19
PTPN1P18031 AL139094.1-201ENST00000405549 1188 ntBASIC16.26■□□□□ 0.19
PTPN1P18031 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN1P18031 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.26■□□□□ 0.19
PTPN1P18031 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.26■□□□□ 0.19
PTPN1P18031 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PTPN1P18031 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.26■□□□□ 0.19
PTPN1P18031 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.26■□□□□ 0.19
PTPN1P18031 IGHV3-71-201ENST00000523324 359 ntBASIC16.26■□□□□ 0.19
PTPN1P18031 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.26■□□□□ 0.19
PTPN1P18031 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.26■□□□□ 0.19
PTPN1P18031 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.26■□□□□ 0.19
PTPN1P18031 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.26■□□□□ 0.19
PTPN1P18031 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN1P18031 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN1P18031 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN1P18031 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.26■□□□□ 0.19
PTPN1P18031 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PTPN1P18031 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN1P18031 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PTPN1P18031 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN1P18031 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
PTPN1P18031 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PTPN1P18031 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN1P18031 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTPN1P18031 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN1P18031 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN1P18031 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN1P18031 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PTPN1P18031 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN1P18031 AC126365.1-201ENST00000578585 1514 ntBASIC16.25■□□□□ 0.19
PTPN1P18031 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.25■□□□□ 0.19
PTPN1P18031 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.25■□□□□ 0.19
PTPN1P18031 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.25■□□□□ 0.19
PTPN1P18031 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.25■□□□□ 0.19
PTPN1P18031 PPT1-215ENST00000641471 2368 ntBASIC16.25■□□□□ 0.19
PTPN1P18031 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PTPN1P18031 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN1P18031 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN1P18031 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.25■□□□□ 0.19
PTPN1P18031 AC234783.1-201ENST00000441761 496 ntBASIC16.25■□□□□ 0.19
PTPN1P18031 ATP5G2P4-201ENST00000442175 420 ntBASIC16.25■□□□□ 0.19
PTPN1P18031 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms